Desulfovibrio subterraneus: LN040_14960
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Entry
LN040_14960 CDS
T08953
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
dsb
Desulfovibrio subterraneus
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsb03009
]
LN040_14960
Enzymes [BR:
dsb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
LN040_14960
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
LN040_14960
Ribosome biogenesis [BR:
dsb03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LN040_14960
23S rRNA modification factors
LN040_14960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_12
TyrRSs_C
OxoDH_E1alpha_N
Methyltransf_11
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
WBF67001
LinkDB
All DBs
Position
3436218..3436964
Genome browser
AA seq
248 aa
AA seq
DB search
MAKKERADQLIHEAGLAESREKAKRLVMAGQVYLLRNGVPEPVQKPGQKLDFETEFEVRG
VERFVSRGAYKLLTAIEHFGINVEGLVALDAGASTGGFTDCLLQHGALRVYAADVGYGQL
HEKLRQDPRVINLERTNLRLATPDLIPEPVDVVVADVSFISLTLILPPCVQFMRDGGVLA
VLIKPQFELGPDRTDKGVVRDPELHQEAIDKVCSFAREQLGLTIEGVVPSSIKGPKGNQE
FIAYMKKG
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaagagcgggcagatcaactgattcatgaagcaggacttgcggaaagccgt
gaaaaggcaaagcgccttgtcatggcagggcaggtgtacctgttgcggaacggcgttccg
gagccggtgcagaaacccgggcagaagcttgattttgaaacggaattcgaggtgcgtggc
gtggagcgtttcgtgagccgcggggcatataaactgctcacggccatcgagcacttcggg
attaatgttgaaggattggtggctcttgatgccggcgcgtcaacgggagggtttacggac
tgtttgttgcagcacggggctctccgggtgtacgccgcagatgtgggctacgggcagctg
catgaaaaactgcggcaggatccgcgcgtcatcaatctggaacgcacgaatctccgtctt
gcaactcccgacctcattcccgaaccggtggatgttgtcgtggcagatgtctcgttcatc
tcacttacgctcatccttcctccctgtgtccagttcatgcgggatggcggcgtgctcgcc
gtgctgataaagccccagtttgaactgggaccggaccgcacggacaagggcgtggtgcgc
gaccccgaactgcatcaggaagccatagacaaggtgtgcagctttgctcgcgagcagctt
ggtctgaccattgagggggtggtgccttcgagcatcaaagggcccaaggggaatcaggag
ttcatcgcctacatgaaaaagggctag
DBGET
integrated database retrieval system
