KEGG   Desulfovibrio subterraneus: LN040_15325
Entry
LN040_15325       CDS       T08953                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
dsb  Desulfovibrio subterraneus
Pathway
dsb02020  Two-component system
Brite
KEGG Orthology (KO) [BR:dsb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LN040_15325
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:dsb02022]
    LN040_15325
Two-component system [BR:dsb02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   LN040_15325
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 AAA AAA_2 Mg_chelatase AAA_3 MCM ATPase AAA_19 bpMoxR Arm-DNA-bind_2 HMA
Other DBs
NCBI-ProteinID: WBF67069
LinkDB
Position
complement(3516572..3517966)
AA seq 464 aa
MPSKAHILIIDDEEAIRFSLRGILEDEGHTVAEAETGEAGLEMLQSEQPDLVFLDIWLPG
MDGLSVLAKIKERDSSLPVIMISGHGNIETAVTAIKRGAHDFIEKPLSLEKVVIAAAKAL
EFHNLRKENLALRTRIATEQSVTVTGDSTPIVKLREQIERVAPTDAWVLITGENGTGKEI
AARSIHAQSKRKDKALVAVNCAAIPEELIESELFGHEKGAFTGADQAKTGKFELADNGTL
FLDEIGDMSMKTQAKILRILQEQCFERVGGNKTMHVNVRVIAATNKNLEEEIQKGNFRED
LYYRLRVFPLSLPPLRNRGDDILKLIREFHAGLVREHGFKPINFSKEAEQYLLAYPWPGN
VRELKNFVERMLIMFAGQTVDVLDLPPEFATARSASPSVSIDGSAGIDPGAVDFKMARNA
FEAAFLESKLKEFDGNITRLAEAIGLERSYLYRKLKSYNIQTAE
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgccaagcaaagcgcacatactgattatagacgacgaagaagcaatacggttttccctg
cggggcattctggaagacgaaggccacaccgtggcggaagcagaaaccggagaagccggt
ctggagatgctgcagagtgagcaacccgacctcgtctttctggacatctggctccccggc
atggacggcctttccgttctggccaaaattaaggaacgggacagctcgctgcctgtcatc
atgatatccggccatggcaatatcgaaacggctgtcaccgccataaagcgcggtgcgcat
gacttcatcgaaaagcccctttcactggaaaaggtggttatcgccgctgccaaagccttg
gaatttcataacctgcgcaaggaaaaccttgccctgagaacccgcatagccaccgaacag
agcgtgacggtcacgggcgattccacccccattgtcaagctgcgcgagcagattgaacgg
gtggcccccacggatgcgtgggtgctcattaccggcgaaaacggcaccggcaaagaaatt
gccgcccgctccatacacgcccagtcaaaacgcaaagacaaggcactggtggccgtgaac
tgtgccgccattcccgaagaacttatcgagagcgaactcttcggccatgaaaagggcgcc
tttaccggagctgatcaggccaagacaggcaagttcgaactggcggacaacggcactctc
ttccttgatgaaatcggcgacatgagcatgaagacgcaggccaagattctgcgcattctg
caggaacagtgctttgaacgggtgggtggcaacaagaccatgcatgtcaacgtgcgtgtc
atagccgccaccaacaagaatctcgaagaagaaatccagaaagggaacttccgcgaagac
ctctactaccgcctgcgggtgttcccgctttcgcttccgccgctgcgcaaccgcggcgat
gacattctcaaactcatacgggaattccatgcggggctggtgcgcgagcatggattcaag
cccatcaacttctcgaaagaagcggaacaatacctgcttgcctacccctggccgggcaac
gtgcgcgagctgaaaaactttgtggaacgcatgctcatcatgttcgcgggacaaaccgtg
gatgtgctcgatctgccgccggaattcgccaccgcacggtctgcctccccatcggtatcc
atcgacgggagtgccggcatcgatcccggtgccgttgacttcaaaatggcccgtaacgcc
tttgaagccgcttttctggaatcaaaactcaaggaattcgacggcaacatcaccagactt
gccgaagccatagggcttgaacgaagctatctttaccgcaaactcaagtcgtacaatatt
cagactgccgaataa

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