Desulfovibrio subterraneus: LN040_15405
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Entry
LN040_15405 CDS
T08953
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb03030
DNA replication
dsb03430
Mismatch repair
dsb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LN040_15405
03430 Mismatch repair
LN040_15405
03440 Homologous recombination
LN040_15405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsb03032
]
LN040_15405
03400 DNA repair and recombination proteins [BR:
dsb03400
]
LN040_15405
Enzymes [BR:
dsb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LN040_15405
DNA replication proteins [BR:
dsb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LN040_15405
DNA repair and recombination proteins [BR:
dsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LN040_15405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
Rv2179c-like
RNase_H_2
DEDDh_C
NMT_C
Motif
Other DBs
NCBI-ProteinID:
WBF67083
LinkDB
All DBs
Position
3540645..3541445
Genome browser
AA seq
266 aa
AA seq
DB search
MKDASASVKTVRTGKTGKTGFTGRVAGLLQAIRKGLGRWSGPVHPLLEENYMLFAEFDQE
KPIEEYSFVVLDTELTGLSPSRDEIVSIGAVRVSGLSINPSDTLHVMVRPHGAMHKPATL
VHRITPETVADKPPIEDVLPELLRFCNGSLIVGHHVGLDMAFLSRATRRHLGGSIATPCI
DTMRLAQAWEQERWEASFDPFQSNISYNLRDLATYYGLPRFQEHDALQDALQAAYLFVYL
VRKMRGGSIRTLKDLFMAGRSWRWYM
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgcatcggcatccgtcaaaaccgttagaactggcaaaactggcaaaaccggt
tttaccggcagagtcgcagggctgcttcaggccatccgcaaagggctgggaagatggtca
gggccggttcatcccctgctggaagaaaattacatgctgtttgccgagtttgatcaggaa
aagcccatcgaggagtattcctttgtggtgctggataccgagctgaccggactcagcccg
tcgcgggatgaaatcgtctccataggggcggtgcgggtgagcggtctcagcatcaatcct
tctgatacgttgcatgtcatggtgcgcccgcacggagccatgcataaaccggcaacgctg
gtgcatcgcatcactccggaaaccgtggcggacaagccgcccatcgaagacgtgttgccc
gaactgctgcgcttctgcaacggttcactcattgtggggcaccacgtggggctggacatg
gcctttctgagcagggcaacgcgcaggcatctcggcggctccattgccacgccctgtatt
gataccatgcggcttgcgcaggcgtgggagcaggagcggtgggaggcatcgttcgatccg
ttccagtccaacatatcttacaacctgcgtgaccttgccacgtattacgggctgccgcgt
tttcaggagcacgatgccttgcaggatgcgttgcaggccgcctacctctttgtctatctg
gtgcgcaagatgcggggcggctccatccgcaccctgaaggacctgttcatggccggcagg
agctggcgctggtatatgtag
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