Desulfovibrio subterraneus: LN040_16460
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Entry
LN040_16460 CDS
T08953
Name
(GenBank) polysaccharide deacetylase
Organism
dsb
Desulfovibrio subterraneus
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Gene cluster
GFIT
Motif
Pfam:
DUF5693
DUF6282
Polysacc_deac_1
Motif
Other DBs
NCBI-ProteinID:
WBF67284
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Position
complement(3777907..3780021)
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AA seq
704 aa
AA seq
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MQQRLTPFLFGMAGIYLCLLIFCAVLAGTAESGHAAPVPVARKVFVLYSGAAGQLETDNP
WRRAFAMPGNYFGLLSFYQDVANPLPAKLDPAEWRAVVCAYSALTVDNPEGLIRWLLAAS
ERGIRIIFLNHPTQIAEGASPATQEALARLLARLGLAFEQQTTTAGTLLAYETVGSQMNF
ERRLPPLPPVFERFTATGDKSLTPWLTVRNKAQGTTGIAVAVSEAGAMVLPEYIRWMDPA
DFRKQLYIDPFAFVADSMGLRGQPALTPTTLNGKRIAFSHIDADGFNGFTNVDKTRNCAE
IIRDRVLAKVDFPVTVSVIQAEVDPKYEGNAHLMDVARSMFAMPNVEPGSHSFSHPFYWD
SGDDAKAMMFKEKLGLEQYGIPVKGYTFDPKKEIVESARWITENLAPAGKPCRLMQWSGS
CDPKTPVMRILAGAGLQNINGGDTIYDEHNNSLTTVSPLYKQVGPYVQVFTGQANENILT
NLWTGPYHAYRYITRTMERTGSPRRLMPINAYYHFYSAEYEASLQAVLDVYDWMARQDTA
RVFTSAYPPMVQSFTQAHVARDGDTDVFTNYGACLSVRYDDTAKLPDLEHSVNVLGYDVQ
PQGLFVHLAPDAGEARIVLADHPRNARPFIRSATGWIHGFTYDARKVRFQYDGFGKGTVT
LGGLPADSKAVVESVNGKHTVTVDRQGTLVLSDMVSGGVEISIQ
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcgcctcaccccttttctcttcggaatggcgggcatatacctgtgcctgctc
atcttttgcgccgtgctggcgggtacagccgaatccggccatgccgcccctgtgccggtg
gcccgcaaggtattcgttctttacagcggcgccgcggggcagcttgagaccgacaacccg
tggcgcagagcctttgccatgcccggcaactatttcggcctgctctcattctatcaggat
gtagccaatccgctgcccgccaaactcgaccctgccgaatggcgtgccgttgtctgcgca
tacagtgcgcttaccgtggataatcccgaagggctcatccggtggcttctggctgcctcc
gagcgtggcatacgaattatcttcctcaaccatcccacgcagattgcagagggagcatcg
cccgcaacacaggaggcgctcgcaagactgctggcgcggctcggcctcgcctttgaacag
caaaccaccaccgcaggcactctgctcgcctatgaaacggtcggcagccaaatgaacttt
gaacgcaggctcccccccctgccgcctgtctttgaacggttcaccgccaccggcgacaag
agcctcacgccgtggctcaccgtgcgcaacaaggcgcagggcacaaccggcattgccgtt
gccgtgtccgaagcgggtgccatggtcctgccggaatacatccgctggatggaccccgca
gattttcgcaagcagctctatattgaccccttcgcctttgttgcagacagcatgggattg
cgtggccagccagccctcacccccaccacgctgaacggcaaacgcatagccttttcgcac
attgatgccgacggattcaacggcttcaccaatgtggacaagaccaggaactgcgccgag
atcatccgtgaccgggtgctcgccaaagtggattttcccgtgaccgtatcggtcattcag
gccgaagtggacccgaaatacgaaggcaacgcccacctcatggacgtggcccgcagcatg
ttcgccatgcccaacgtggaaccgggatcacacagtttcagccatccgttctactgggat
tccggcgatgacgccaaggccatgatgttcaaagagaaacttggccttgagcaatacggt
atccccgtcaagggctataccttcgaccccaaaaaggaaatcgtggagtcggcgcgctgg
ataaccgaaaacctcgcgccggcgggcaagccctgccgcctcatgcagtggtccggctca
tgcgaccccaaaacaccggtcatgcgcatactggccggggcgggcctgcagaacatcaac
ggcggcgataccatttatgacgagcacaacaactcgctcaccacggtctctcccctgtac
aagcaggtcgggccgtatgtgcaggttttcaccggacaggccaacgagaatattctgaca
aacctgtggaccggcccctaccatgcctaccgctacatcacgcgcaccatggaacggaca
ggcagtccgcgcagactgatgcccattaacgcgtactaccacttctacagtgcggaatat
gaagcatcattgcaggctgtgctggacgtttatgactggatggcccgtcaggataccgca
cgggtgttcacatccgcctatccccccatggtgcagtcctttacgcaggcccatgtggcg
cgcgacggcgataccgatgtcttcaccaactacggagcctgcctcagcgtgcgctatgac
gacacggcaaagctgccggaccttgagcactcggtgaacgtgctcggctacgatgtgcag
cctcagggacttttcgtgcatctggcaccggatgccggtgaagcccgcatagtgctcgcc
gaccatccgcgcaacgcacggccgttcatccgcagcgccacaggctggatacacggcttc
acatacgatgcacggaaggtccgcttccagtatgacggattcggcaaaggcacggtcacg
ctcggcggcctgcccgcagacagcaaggcggtggtggagtctgttaacggcaagcatacg
gtaactgtcgacaggcaaggcacgcttgtcctgtccgacatggtttccggcggggtggag
atcagcattcagtga
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