Desulfovibrio subterraneus: LN040_17220
Help
Entry
LN040_17220 CDS
T08953
Name
(GenBank) PAS domain S-box protein
KO
K08475
two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:
2.7.13.3
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LN040_17220
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dsb01001
]
LN040_17220
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dsb02022
]
LN040_17220
Enzymes [BR:
dsb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
LN040_17220
Protein kinases [BR:
dsb01001
]
Histidine kinases
NtrC family
LN040_17220
Two-component system [BR:
dsb02022
]
NtrC family
PgtB-PgtA (phosphoglycerate transport)
LN040_17220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HAMP
PAS_9
PAS
PAS_4
HisKA
TorS_sensor_domain
PAS_8
HATPase_c_5
Diguanyl_cycl_sensor
HATPase_c_2
PAS_10
NagJ_C
Motif
Other DBs
NCBI-ProteinID:
WBF67423
LinkDB
All DBs
Position
3945370..3947769
Genome browser
AA seq
799 aa
AA seq
DB search
MKKNIPLFFGIWARLLMAFGAIATVTVLAVLTALFLLERSSDIFANITERQLPELAQVAN
FAEIGGQIMAVAPSLASAADEEEQARVRTDLDGLLVRFKRELGVLEQNNPQVASELDQLV
KQLTDNLFALQLRVADRLRLEDVLLKNMERLRWLYSDLLGEIEPLGQDLNYNLDAELDRT
ISAAGKGNRQAAMIRLRTTRSLKKTVESMGNNGDLLVSLLLQASSSEREAQVDNLAALAR
DTGTALKLALEAFSDEASALTLRHSLTEIIALSEGPEGVFAIKKQILEAEADGQTMLADN
RRIVGLLRSSIESIVEHSQQEAFEAAEVTKSKLERATWSQLGLVFLSLVIAACVMWFYVR
GSIVARLNALANSMRAIAHGDLAHPVPEAGGDEIGQMAAALRVFRDTARTVEEANAQAII
DNAAVGLVIVEPDGEIRFFNPMAATLFGVESGGMTGRSLFFLLSERDRAPLREAIAFTFN
GGTDQIQVLCLGVRSDGSEFPVEMVVRPIQQRSQRRLMITMNDVTEREKAEELLRRRVKI
KTDHLSRINERLRQEVKERRRVQDELVQAGKLAALGQLSAGIAHELNQPLSAIRYYIHNA
RLLLQRGQLDMHEENIGKISELSERMAKMINHLKSFARLPSNKLQPVDVVPAMDHALSLL
NRRIADEGIVIERHYENRPHIVLAEDIRLEQVLVNIVGNAVDAVSQQPQDNRRITLDIVE
RGNWLAIEVVDSGPGIPAEVREAIFDPFYTTKEVGKGLGLGLSISYNIVKDMRGAIEASA
AETGGTRFVISFQKVDEQV
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaacatcccgttattcttcggcatatgggcccgcctgctcatggccttcggc
gcaattgcgaccgtgaccgtgcttgcggtgctcaccgccctttttctgctggaacggtcc
agtgatatctttgccaacattacggaacgccagttgccggaactggcgcaggttgccaac
tttgccgagataggcggtcagatcatggccgttgctcccagccttgcctctgcggcggat
gaagaggagcaggcaagggtgcggaccgaccttgatggtctgcttgtgcgttttaaacgc
gagctcggggtgcttgagcagaacaacccgcaggtggccagcgagctggaccagctggta
aagcagctcacggacaatctgtttgccctgcagttgcgcgttgccgaccgtctgcgcctt
gaagatgtgctgctgaagaatatggagcgcctgcgctggttgtattccgacctgcttggc
gagatagagccgctgggtcaggatctgaactacaatctggatgccgaactcgatcgcacc
ataagcgcggcgggtaagggcaacaggcaggccgccatgattcgcctgcgcacaacccgc
agcctcaagaaaaccgttgaaagcatgggcaacaacggggacctgctggtgagtctgctt
ctgcaggcgtcttcgtccgagcgcgaggcgcaggtggataatctcgccgcccttgcgcgc
gataccggcaccgcgctgaagctggcactggaggcattttccgacgaggccagcgccctt
actctgcgccattccctgactgagatcattgccctttcggaagggccggaaggtgttttt
gccatcaagaagcagattctcgaggcagaggcggacgggcagaccatgctcgccgacaac
cggcgcattgtgggactgctcagaagttccatcgaatccattgtcgagcacagccagcag
gaagcctttgaggctgccgaagtgaccaaaagcaagctggaacgcgccacatggtcgcag
ctcgggcttgtgttcctgagccttgtcatagcagcctgcgtcatgtggttctatgtgcgc
ggcagcattgttgcgcggctcaacgcccttgccaacagcatgcgggccattgcccatggt
gatcttgcccaccccgtgcccgaggccggaggcgatgagatagggcagatggctgcagcg
ttgcgcgtttttcgcgatactgcccgcacggtggaagaagccaatgcgcaggccattatc
gataatgcggccgtaggccttgtaatcgtcgagcctgacggggaaatacggttcttcaac
cccatggcggccacgttgttcggcgtggaatccggcggtatgaccggccgttcgctgttt
ttcctgctttcagagagagacagggctcccctgcgtgaagcgatcgcctttaccttcaac
ggtggcacggaccagattcaggtgctctgtctgggcgtcagaagcgacggcagcgagttc
cccgtggaaatggtggtgcggcccattcagcagcgctcgcagcggcggctcatgatcacc
atgaacgacgtgaccgagcgtgaaaaagctgaagaattgctgcgccgacgggtgaagatc
aaaacagaccacctgagccgtatcaatgagcgcctgcgtcaggaagtgaaggaacggcgc
agggtgcaggatgaactggtgcaggcgggcaagcttgctgctctggggcagctgtccgcg
ggcattgcccatgagctcaaccagccgctctctgccatccgctattacatccacaacgca
cggctcttgctgcagcgcgggcagctggacatgcacgaagagaatatcggcaagatcagc
gaactgagcgaacgcatggccaagatgatcaaccatcttaagtcgttcgcgcgtctgcct
tccaacaagctgcagccggtggatgttgttccggcaatggatcatgcgctttcgttgctg
aaccgcagaatagcggacgagggcattgtcatagaacggcattatgaaaaccgcccccac
attgttcttgcggaagacatacggctcgaacaggtgctggtgaatatcgtgggcaacgcc
gtggatgcggtgtcgcagcaaccgcaggataacaggcgcatcacgctggatatcgtggag
cgcggcaactggctggccattgaggtggtggacagcggccccggcattcccgccgaagtt
cgcgaggccatattcgaccccttctacaccaccaaggaggtgggcaagggactcgggctg
gggctttccatttcctataatatcgtgaaggacatgcgcggagccatagaggcttctgcc
gcagaaaccggcggtacccggtttgtcatttcattccagaaggttgatgagcaggtatga
DBGET
integrated database retrieval system
