KEGG   Desulfovibrio subterraneus: LN040_17225
Entry
LN040_17225       CDS       T08953                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
dsb  Desulfovibrio subterraneus
Pathway
dsb02020  Two-component system
Brite
KEGG Orthology (KO) [BR:dsb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LN040_17225
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:dsb02022]
    LN040_17225
Two-component system [BR:dsb02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   LN040_17225
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_2 AAA_3 Mg_chelatase AAA OKR_DC_1_N FleQ
Other DBs
NCBI-ProteinID: WBF67424
LinkDB
Position
3947766..3949121
AA seq 451 aa
MTTIGEVFLVDDEAEIRQACRQTFELEGYAIRTFKSADEVLTEISPDWLGVVISDVRMPG
MDGLELLRRIKELAPELPVIILTGHGDVPMALEAIRLGAYDFLEKPAPPEYLIDVARRAL
DARRLCLENRNLKQQLETSFDLESRILGNSPGIKQLRQTVASLATIDVDVLLLGETGVGK
ELTARSMHECGARRAGAFVALNCGAIPANLVESELFGHERGAFTSAMNRRIGKIEQAQGG
TLFLDEVESMPLDIQVKLLRALQERVVERVGSNKSIAVDYRVIAASKIGLREAVRSGAFR
EDLFYRLNVARVAIPPLRERTEDIMLLLRHFMGIMSERFHRAIPEISPETMSKLQQYYWP
GNVRELRNVAQQLVLGLPLDLSAAHLSDDGDDSPRLFDKAAPLDDLMEQYEKQVIEEALA
RNEGKIEKTAQYLGIPRKRLYLRMQKYGLQK
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgacaacaataggtgaagtttttctcgtagatgatgaagcggagatccggcaggcctgc
cggcagacctttgagctggagggctatgccatccgcacgttcaagtctgccgatgaagtt
ctgaccgaaatctcccccgactggctgggtgtcgttatcagcgatgtgagaatgccggga
atggatgggcttgagctgctgcggcggatcaaggaactggctcccgaattgcccgtgatc
atccttacggggcacggcgatgtgcccatggcgctggaagctatccgcctcggcgcgtac
gattttctggaaaaacccgcaccgcctgaatatctgatagacgtggccagacgcgctctg
gacgcacgccgcctctgccttgaaaaccgcaacctgaaacagcagctggaaaccagtttt
gatctggaatcccgcattctgggcaattctccgggtatcaagcagttgcggcagactgtt
gccagccttgccaccattgatgtggacgtgctcctgcttggtgaaacaggggtcggcaag
gaactcaccgcccgttccatgcacgaatgcggcgcccgcagggcaggggcctttgtggcg
ctgaactgcggtgccattcctgccaatctggtggaaagtgaactgttcggtcatgaacgg
ggcgcttttaccagtgccatgaaccggcgcatcggcaagatagagcaggcacagggcggc
accctgttccttgacgaagtggaatccatgccgctggacattcaggtcaagctgttgcgc
gccctgcaggagcgcgtggtggagcgcgtgggcagcaacaagagcattgccgttgattat
cgtgttattgccgcttccaagatcggcctgcgcgaggccgtgcgcagcggcgccttccgc
gaagacttgttctatcgcctgaacgtggcgcgggtggccattccacccctgcgggaacgg
acagaagacatcatgctgctgcttcgccacttcatgggcatcatgtctgagcggttccac
agggccattcccgaaatttctcccgaaaccatgagcaagctgcagcagtattactggccc
ggcaacgtgcgcgagttgcgcaacgtggcgcagcagctggttctggggttgccgctcgat
ctttccgcggcgcatctgagtgatgatggcgacgattctccccgccttttcgacaaggct
gctccgctggacgacctgatggagcagtatgaaaagcaggtgattgaagaagcccttgcc
cgtaacgaagggaagatcgaaaaaacagcccagtatctgggtattccccgcaagcggctg
tatctgcgcatgcagaaatacggcttgcagaaatag

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