Desulfovibrio subterraneus: LN040_17420
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Entry
LN040_17420 CDS
T08953
Name
(GenBank) PAS domain-containing protein
KO
K13924
two-component system, chemotaxis family, CheB/CheR fusion protein [EC:
2.1.1.80
3.1.1.61
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb02020
Two-component system
dsb02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LN040_17420
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
LN040_17420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dsb02022
]
LN040_17420
02035 Bacterial motility proteins [BR:
dsb02035
]
LN040_17420
Enzymes [BR:
dsb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.80 protein-glutamate O-methyltransferase
LN040_17420
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.61 protein-glutamate methylesterase
LN040_17420
Two-component system [BR:
dsb02022
]
CheA family
CheA-CheYBV (chemotaxis)
LN040_17420
Bacterial motility proteins [BR:
dsb02035
]
Flagellar system
Chemotaxis proteins
Two component system proteins
LN040_17420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CheB_methylest
CheR
PAS_10
CheR_N
PAS
PAS_9
PAS_4
PAS_8
PAS_3
CENP-F_leu_zip
Golgin_A5
HMMR_N
HAP1_N
Leu_zip
IFT57
TACC_C
Fez1
NET2A_C
KASH_CCD
COG6_N
MEKHLA
CorA
Frankia_peptide
Sec8_N
DUF6664
PCRF
HAUS-augmin3
DUF7260
FapA
TPR_MLP1_2
Fusion_gly
Motif
Other DBs
NCBI-ProteinID:
WBF67463
LinkDB
All DBs
Position
complement(3997571..4000585)
Genome browser
AA seq
1004 aa
AA seq
DB search
MIKKSSTMKTQPKADAPAAEVTPHVTTPVVGIGASAGGLAAFEAFFSGMPDDVASGLAFV
LVQHLAPDHKSLLTEIIRRYTSMQVFEVEDGMKVEPNCAYIIPPNRDMAYLDGKLQLIEP
AAPRGQRMPIDFFFRSLALGLNEVAIGVVLSGTGSDGTLGIRAIKKAGGMVIAQTPASCE
YDGMPRNAIATGLVDYDLPPSEMAAQIFTYVARTVSSPLHTAPAPKLINDDALHTIFIML
HARTGHDFSQYKPSTIQRRIERRMALNQIATQDDYIRYLQQNATETDALFRDLLIGVTGF
FRDPDAFTALEKEVIPRLFANKPSGSLVRIWSTGCSSGEEAYSFAILMQEHLERVRERYV
VQIFATDIDSNAIATARSGLYPASIAEDISPERLARFFTAEADGNVYRIHKTIRDMLVFS
EQNVIKDPPFSKLDCIVCRNLLIYMGGDLQRKLIPLFHYALNPGGFLFLGTSETVGDFGD
LFTTIDRKLKLYQRKDTLHDRHHVAMGRFLPPRPTLETPYPRSAIKEIDPAKLPLRELTE
QALLKQFAPAGVLVNARGDILYFHGRTGQYLEPSPGEAGVSNILKMAREGLRRGLSTTLH
KAHSTGKTHRSKGLRIKSNSGFISVNITTCPVTAGSIAHGFPMYLVILEAAPQSDRDTAQ
TAGPAETGGHIDGLPINRDVDIEILRQELLAKEEYLQTAIEELETSNEELKSSNEEMQAI
NEELQSSNEELETSKEELQSVNEELATVNAELQNKLADLSQTNNDMSNLLSGTGIATVFV
DLQLRLLRFTPAATRIINLIQVDIGRPVGHIASNMVGYTSMVADVQSVLETLVPKELDVR
TEEGKWYTMRIQPYRTIENVIEGAVITFVDITEMKKSHELLQEAHDQLRLVGVVRDSQDA
IAALNMRGDIISWNPSAQRLFGWSEEEALTMNIQEMTAEENREHELETIRSVAAGSMVQY
ETIRLNKEGQSIPILLTATFLVNNSGSIYAMAVTQRVTQGRIQA
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaaatcaagcacgatgaagacccagccgaaagcagacgccccggcagcagag
gtaacaccccatgtgaccactcccgtcgtaggcatcggagcctcggcagggggccttgct
gccttcgaagcttttttttccggcatgcctgacgatgtggcctccggactggccttcgtt
ctggtacaacacctcgccccggaccataaaagcctgctgaccgagatcatccgccgctac
acatccatgcaggtatttgaagtcgaagacggaatgaaagttgaacccaactgcgcctat
atcatcccgcccaaccgcgacatggcctatctggacggcaagctccagttgattgaaccc
gcagccccccgtggacagcggatgcccatagacttcttcttccgctcgctggctctcggc
ctcaatgaagtggcaatcggcgtagtattgtcgggcaccggcagtgacggtaccctcggc
atacgcgccattaaaaaggctggcggaatggttatagcccagacaccagcctcttgtgag
tatgacggcatgccacgaaatgccattgccaccggtctggtggattacgacctgccgcct
tccgaaatggccgcacagatattcacttacgtggcccgcaccgtcagttcccccctgcac
acggcccccgctcccaaacttataaacgacgatgcgctgcataccatcttcatcatgctg
cacgcccggacgggacacgacttttcccagtataaaccaagcaccatacagcgccgcatc
gaacggcgcatggccctgaaccagattgccacgcaggatgactacatccgctacctgcag
cagaatgcgacagaaacggatgcgctctttcgtgacctgctcatcggagttaccggtttc
ttccgtgacccggatgccttcacagcgcttgagaaagaagtgatacccaggctatttgcc
aacaaaccctccggctcccttgtacggatatggtcaactggatgttcctccggcgaggag
gcatactcctttgccatcctcatgcaggaacatctggagagggtacgcgagcgctacgtg
gtacagatatttgccaccgatatagacagcaacgctatcgccacggcccgaagcggactg
tatcccgccagtatagccgaagacatttctccggaacggctggcgcgttttttcaccgca
gaggcggacggcaacgtttaccgcatccacaaaaccatccgcgacatgctggttttttcc
gagcagaacgtaatcaaggatccgccattttccaagctggattgcattgtctgccgcaac
ctgctcatatacatggggggagacctgcaacgaaagctcattcccctattccattacgcc
ttgaaccctgggggctttctctttctgggcacctcggaaaccgttggcgattttggagat
cttttcaccacgatagaccgcaagctgaagctctatcagcgcaaggacaccctgcatgac
aggcaccatgttgcaatgggccgctttctgccgcccagaccgacacttgaaacgccatac
ccccggtctgccatcaaggaaatcgatccggcaaagctgcccttacgcgaactgaccgag
caggcactgttaaaacagttcgccccggccggggtgctggtaaacgcccgcggcgacatt
ctctacttccacggtcgcaccggtcagtatctggaaccttcccccggtgaagccggtgtc
agcaacattctcaaaatggcacgagaaggattacgccggggattgagcaccacgcttcac
aaagcccattcaaccggaaaaacccaccggagcaaagggctacgaatcaaatcgaacagc
ggcttcatatcggtcaacattacaacctgtcctgttacggctggttcgattgcccatggt
ttccccatgtacctcgtcattcttgaagccgcgccgcagtccgaccgggatacggcacag
accgccggtcccgctgaaacagggggacatatagacggcctgcccataaacagggatgtc
gacatagagatattacggcaagaattgctggccaaagaggaataccttcagactgccatt
gaggaactggagacgtccaacgaggagctcaaatcctccaatgaagaaatgcaggctatc
aatgaagaactgcaatcctccaatgaagagctggaaacctccaaggaagaactacaatcc
gtcaatgaggaactggccaccgtcaatgccgaattacagaacaagctggccgacctgtct
caaaccaacaatgacatgagcaaccttctttccggcacaggcatagccacggtcttcgtt
gacctgcagctgcgcctgctgcgcttcacccctgccgcaacccggataatcaacctgatt
caggtggatatagggcggccagttggacacatcgcgtccaacatggtgggctataccagc
atggttgcagacgtgcagtccgtactggaaacgctggtacccaaggaactggatgtgcgg
acagaggaaggcaagtggtacacaatgcgcatccagccttaccgtaccattgaaaacgtg
attgagggggccgtcatcacctttgttgacataaccgaaatgaaaaaatcgcacgaactg
ctgcaggaagctcacgaccagctccgcctggtcggggttgtcagggattcgcaagatgcc
attgcagccttgaatatgaggggagatatcatctcatggaacccttctgcccaaaggctt
ttcggctggagcgaagaagaggcactcaccatgaatatccaggaaatgaccgcagaagag
aatcgggaacacgaactggaaacaatacgcagtgtcgctgccggcagcatggtgcagtat
gagacgatccgcctgaacaaagaggggcagtccattcccattctgctcacggcgactttt
ctggtcaacaattctggcagcatatacgctatggccgtcacgcaacgcgtgacacaaggg
aggatacaggcatga
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