KEGG   Desulfovibrio subterraneus: LN040_17640
Entry
LN040_17640       CDS       T08953                                 
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
dsb  Desulfovibrio subterraneus
Pathway
dsb00260  Glycine, serine and threonine metabolism
dsb00460  Cyanoamino acid metabolism
dsb00630  Glyoxylate and dicarboxylate metabolism
dsb00670  One carbon pool by folate
dsb00680  Methane metabolism
dsb01100  Metabolic pathways
dsb01110  Biosynthesis of secondary metabolites
dsb01120  Microbial metabolism in diverse environments
dsb01200  Carbon metabolism
dsb01230  Biosynthesis of amino acids
dsb01240  Biosynthesis of cofactors
dsb04981  Folate transport and metabolism
Module
dsb_M00140  C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:dsb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    LN040_17640
  09102 Energy metabolism
   00680 Methane metabolism
    LN040_17640
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LN040_17640
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    LN040_17640
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    LN040_17640
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    LN040_17640
Enzymes [BR:dsb01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     LN040_17640
SSDB
Motif
Pfam: SHMT Beta_elim_lyase DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: WBF67505
LinkDB
Position
complement(4053798..4055036)
AA seq 412 aa
MDELFLQDPEVARAMYLEIERQTGGLELIASENFVSSAVRQTQGSVMTHKYAEGYPGKRY
YGGCEFVDMAEDLAINRAKTIFGAEYANVQPHSGSQANMAAYFAIAKPGDTILGMDLSHG
GHLTHGSPVNFSGRFFNVVFYGVQKETGRIDYDQVEKLAKEHKPTVIVAGASAYPRELDF
ARFRSIADEVGAKLMVDMAHIAGLVAAGVHSSPIPYAHITTTTTHKTLRGPRGGMILSSE
DLGKSLNSQIFPGIQGGPLMHVIAAKAVAFGEALRPEFADYQKQVVANAQALAKCLTDQG
FELVSGGTDNHLMLVDLSNKDITGKAAQLALDEAGITVNKNTVPFETRSPFVTSGIRIGT
PALTTRGMKGKDMEKVADWIIDALGNIENETRLKAIRKEVELFARQFPIFAW
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggacgaactgttcttgcaagaccccgaagtagcacgggcaatgtatctggaaatcgag
cgccagaccggcgggctcgaacttatcgcatccgagaacttcgtctcttccgcagtgcgc
cagacgcagggtagcgttatgacgcacaagtatgccgaaggatacccgggcaagcggtac
tatggcggttgtgagttcgtggatatggccgaagatctggccataaaccgcgcaaaaacc
attttcggggccgaatacgccaacgtgcagccccactccggcagccaggccaacatggcg
gcatacttcgccattgccaagcccggcgacaccattctgggtatggatctttcccacggc
ggccacctcacccacggcagccccgtgaacttctccggtcgtttcttcaacgtcgtcttc
tacggcgtgcagaaggaaaccggccgcatcgactatgatcaggtggaaaagctcgccaag
gaacacaagcccactgtcatcgtggccggcgcaagcgcttatccccgcgaactggatttc
gcacgcttccgctccattgccgacgaagtaggcgcaaagctcatggtggacatggcgcac
atcgccggccttgtggccgcaggcgtgcacagctcccccattccctacgcacacatcacc
accacgaccacccacaagacccttcgcggtccgcgcggcggcatgattctcagctccgag
gatctcggcaaatccctgaacagccagatattccccggcattcagggcggtccgctcatg
cacgtcatcgctgccaaggccgttgccttcggcgaggctctgcgccccgaattcgctgac
taccagaagcaggttgtggcaaacgcacaggcacttgccaagtgcctgaccgatcagggc
ttcgagctcgtttccggcggcactgacaaccacctcatgctggttgacctgtccaacaag
gacatcaccggcaaggccgcacagctggcgctggacgaagcaggcatcaccgtgaacaag
aacaccgtgcccttcgaaacccgcagccccttcgtgacctccggtatccgcatcggcacc
cctgccctcaccacccgtggcatgaagggcaaggacatggaaaaggtcgccgactggatc
atcgacgcgctcggcaatatcgaaaacgaaacgcgcctcaaggccatccgcaaggaagtg
gaactcttcgcgcgccagttcccgatcttcgcctggtag

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