Deinococcus sonorensis: ABOD76_09235
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Entry
ABOD76_09235 CDS
T10415
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dsc Deinococcus sonorensis
Brite
KEGG Orthology (KO) [BR:
dsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsc03032
]
ABOD76_09235
03400 DNA repair and recombination proteins [BR:
dsc03400
]
ABOD76_09235
Enzymes [BR:
dsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABOD76_09235
DNA replication proteins [BR:
dsc03032
]
Prokaryotic type
DNA Topoisomerases
ABOD76_09235
DNA repair and recombination proteins [BR:
dsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABOD76_09235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
XBV86477
UniProt:
A0AAU7UE71
LinkDB
All DBs
Position
complement(824293..825318)
Genome browser
AA seq
341 aa
AA seq
DB search
MTTRTELLQETYLRREGNKPDAFRYFEPDGREYRDAAGLERIARLAVPPAYQDVYVSPDP
DAELQAFGRDAAGRLQYRYHPEFMQAGALRKWQRLTRFAGVLPTLRTVTGSDLRRSGLPE
RKVLALMTRLLHVGHFRVGSDGYAAAHRTYGLSTLRHRHVTVSGTTVTFDFRGKHGIQQH
KATRDATLAANISRLLELPGPWLFQAVQDEGRFRVRAGQLNRYLGEVIGPFTAKDFRTWG
GTLTAAEYLAEAGVAGSERAARRTLVECVKYVADDLGNTPAVVRGHYVCPVIFDRYLEGK
VLDDYEPRATRADNLEGLTRSEAALKRMLESEKSLRTRRRG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacccgcaccgagctgctgcaggaaacctacctgcgccgtgaaggcaataagccg
gacgccttccggtacttcgagccggacggccgcgagtaccgtgacgcggcgggcctggag
cgcatcgcgcggctggcggtgccgcccgcgtatcaggacgtgtacgtgagccccgacccg
gacgccgaactgcaggccttcggccgggacgcggccgggcggctgcagtaccgctaccac
ccggagttcatgcaggcgggggcgctgcgcaagtggcagcggctgacccgcttcgccggg
gtgctgccgaccctgcggaccgtgaccggcagcgacctgcgccgcagcggcctgccggag
cgcaaggtgctggccctaatgacccggctgctgcacgtggggcacttccgggtgggcagc
gacggctacgcggcggcccaccgcacctacggcctgtccacgctgcggcaccggcacgtc
acggtcagcggcaccaccgtgacctttgatttccggggcaagcacggcatccagcagcac
aaggccacccgcgacgccaccctggcggccaacatctcgcggctgctggagctgccgggc
ccgtggctgtttcaggcggtgcaggacgaggggcgcttccgggtgcgggccgggcagctc
aaccgctacctgggcgaggtgatcggcccgttcaccgccaaggacttccgcacctggggc
gggacgctgacggccgccgagtacctcgcggaggcgggcgtggccggcagcgagcgcgcc
gcgcgccgcaccctggtggagtgcgtcaaatacgtcgccgacgacctgggcaacaccccg
gcggtggtgcgcggccactacgtctgcccggtgatctttgaccgctacctggagggcaag
gtgctggacgactacgagccccgggccacccgcgccgacaacctggagggcctgacccgc
agcgaggcggccctgaagcggatgctggagagcgaaaagtcgctgagaacccgccgccgg
ggctga
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