Deinococcus sonorensis: ABOD76_12755
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Entry
ABOD76_12755 CDS
T10415
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
dsc Deinococcus sonorensis
Pathway
dsc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABOD76_12755 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsc03019
]
ABOD76_12755 (rny)
Messenger RNA biogenesis [BR:
dsc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ABOD76_12755 (rny)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_2
KH_KhpA-B
Propep_M14
Motif
Other DBs
NCBI-ProteinID:
XBV84310
UniProt:
A0AAU7U731
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All DBs
Position
1537333..1538988
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AA seq
551 aa
AA seq
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MTYLYVILALLIGLTGGMWYGWGRGRGQRAVLDDQLQREARAEAERIRTEAETQAQQVRA
EAARLREDASRVHQEAEHRQAQAAAQRDAAMLQRDAAIADAQREREGLQADRQDTKRERD
ELKREIERLNRRAEQLDARGEKLDTLEERLEREHKRLTDQEAGLQERTRAVELKLYEVAG
LSQEQAREQILGRLDAELEEEKAIRVKAMQERATADAKRQARHIIAQAIQRSASETSAAL
SVSVVPIPSDGMKGRIIGREGRNIRAFEALTGVDLIIDDTPEAVILSSFNPVRREVARHV
LEALVQDGRIHPSRIEEMVHRAQDDMKAFIHNQGEEAAIEAGVVGIKPGLVQLLGRMYFR
TSYGQNVLKHSVQVAHLTGIMAAELGLDVSVARRAGLMHDVGKSIDREIEGTHVDIGVSL
ARRFGESPEVVDAIAHHHDPENGETLYSVLVAAADAISAARPGARREELESYIKRLEALE
HIAVSFPGVQQAYAVQAGREVRVLVQPEKVSDAQATLLAREIASRVEQDMEYPGQVQVTV
VRESRAVEIAK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgacttatctctatgtcattctggcgcttctgatcggtctgacaggcggcatgtggtac
ggctggggacggggacggggccaacgcgccgtgctcgacgaccagctgcaacgggaagcg
cgggctgaggccgagcggatccggacagaggcggagacgcaggcccagcaggtccgggcc
gaggcggcgcggctccgtgaagacgccagcagggtgcatcaggaggcagaacacaggcag
gcgcaggcggcagcccagcgcgacgcggcgatgctgcagcgcgacgcggccattgccgac
gcccagcgcgagcgcgagggactccaggccgatcgccaggacaccaagcgtgagcgcgac
gaactcaagcgcgagatcgagcggctcaaccgccgggccgagcagctggatgcccgcggc
gagaagctcgacacgctggaagaacggctggagcgcgaacacaagcgcctgactgatcag
gaggcgggcctgcaggagcggacccgtgcggtggagctcaagctgtacgaggtggccggg
ctcagccaggaacaggcgcgcgagcagatcctgggccggctggacgcggagctggaagag
gagaaggccatccgggtcaaggcgatgcaggaacgcgccacggcggacgccaagcggcag
gcccgccacatcatcgcccaggccatccagcgcagcgcctccgagacctcggcggcgctg
tccgtctcggtggtgccgattcccagcgacggcatgaaggggcgcatcatcgggcgcgag
ggccgcaacatccgggccttcgaggcgctgaccggcgtggacctgatcattgacgacacc
ccggaagcggtgatcctgagcagcttcaacccggtgcggcgcgaggtggcccggcacgtg
ctggaagcgctggtgcaggacggccgcatccatccgagccgcatcgaggagatggtgcac
cgcgcccaggatgacatgaaggccttcattcataaccagggcgaggaggcagccatcgag
gcgggcgtggtgggcatcaagccggggctggtgcaactgctgggccgcatgtacttccgc
accagctacgggcagaacgtgctgaagcacagcgtgcaggtggcgcacctgaccggcatc
atggccgcggagctggggctggacgtgtcggtggcgcgccgtgcgggcctgatgcacgac
gtgggcaagagcatcgaccgtgagattgaaggcacccacgtggacattggcgtgagtctg
gcgcggcgcttcggggagagccccgaggtggtggacgccattgcccaccaccacgacccg
gagaacggcgagacgctctacagcgtgctggtggccgccgccgacgccatctcggcggcc
cggcccggcgcgcggcgcgaggagctggaaagctacatcaagcggctggaggcgctggag
cacatcgcggtcagctttcccggcgtgcagcaggcctacgcggtccaggcgggccgcgag
gtgcgggtgctggtgcagccggagaaggtcagcgacgcccaggcgaccctgctggcccgc
gagattgccagccgggtggagcaggacatggagtaccccggtcaggtgcaggtgacggtg
gtgcgcgagagccgggcggtcgagatcgccaagtag
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