Deinococcus sonorensis: ABOD76_15030
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Entry
ABOD76_15030 CDS
T10415
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dsc Deinococcus sonorensis
Pathway
dsc03410
Base excision repair
dsc03430
Mismatch repair
dsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABOD76_15030
03430 Mismatch repair
ABOD76_15030
03440 Homologous recombination
ABOD76_15030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsc03400
]
ABOD76_15030
DNA repair and recombination proteins [BR:
dsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ABOD76_15030
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABOD76_15030
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABOD76_15030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_C_Deinoc
DHH
RecJ_OB
DHHA1
His_biosynth
Motif
Other DBs
NCBI-ProteinID:
XBV84749
UniProt:
A0AAU7U968
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All DBs
Position
complement(1997438..1999516)
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AA seq
692 aa
AA seq
DB search
MKTPLPTVPRWQLAAPASLSELLGTMTEFEVPAPLAQLLHARGLRREHLFPERVLTPNPG
LHEAARRLVQAIRLEKTIRIHGDYDADGVTATAVLVLGLRALGANVHGFIPHRLKEGYGI
HLDRVEEHAEACDVLVTVDCGVTNLEEVRSLLSRGLEVIVTDHHSPGPDFPDCLVAHPKL
TAHYDPALHNLTGAGVAYHLLWAVHEELGEPEPLQYAPLATLGTIADVAPLLGENRALVQ
AGLKGFRRTTLPGLRALMDGQPDAEMTTRNVAFVLAPRINAAGRLGEADLALELLTTDST
RRAQELAVYLEARNADRRVLQDQMYQQALQMADPSDPAIVVTHPDWHPGVMGIVAAKLLE
AYHKPVYIVAQGKGSVRSTPGISAVGGLHHAADLLHKYGGHPGAAGFSLRDGQYPALRER
LHDYARQFPRPVPLLTLDAGLPVSLVTPAFAEEIARFEPFGEGMAAPLWHLHGELEQPRL
VGKTSGTLQFTLEGVRGVKYREAQLPTGLRDLAATIQQNEFRGRVRTELMLEGLRPAAPL
DLAGEGASSLSLPRLDPKSAMQHLRAGANAYAEGKVAEYLTENIPGVQLLGPDARLSGEV
VLYGLPPEDTLGRWLAAAAAGTGRVSFAWGPRTLDDLGGYTGRERGAPAQAAAYRRWQWA
HLYRHLSDEGWTEAALKMQGVALPVEVAGVAD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactcccctcccgacggtgccgcgctggcagctggccgcccccgccagcctgagc
gagctgctcggcaccatgaccgaattcgaggtgccggccccgctggcccagctgctgcac
gcccgtggcctgcgccgcgagcacctgttcccggagcgcgtactcacccccaaccccggc
ctgcacgaggcggcccggcggctggtgcaggcgatccggctggaaaagaccatccgcatc
cacggcgactacgacgccgacggcgtgacggccaccgccgtgttggtgctggggctgcgc
gccctgggcgcgaacgtccacggcttcattccgcaccgcctcaaggaaggctacggcatt
cacctggaccgggtggaggaacacgccgaagcctgcgacgtactggtgacggtggactgc
ggcgtgaccaacctggaggaggtgcgcagcctgctgagccggggcctggaggtgatcgtc
accgaccaccactcgcccggcccggactttcccgattgcctggtggcgcacccgaaactg
acggcccactacgacccggcgctgcacaacctgaccggcgcgggcgtggcgtaccacctg
ctgtgggcggtgcacgaggagctgggcgagccggagccgctgcagtacgcgccgctggcg
acgctcggcaccatcgcggacgtggccccgctgctgggcgagaaccgggcgctggtgcag
gcggggctgaagggcttccgccgcaccaccctgccgggcctgcgggcgctgatggacggc
cagccggatgcggagatgacgacccgcaacgtggcgttcgtgctggcgccccgcatcaac
gcggccgggcgcctgggcgaggctgaccttgcgctggagctgctcaccaccgacagcacc
cgccgcgcgcaggagctggcggtgtatctggaggcgcgcaacgccgaccggcgcgtgctg
caggaccagatgtaccagcaggcgctgcaaatggccgaccccagcgacccggccatcgtg
gtgacgcacccggactggcatcccggcgtgatgggcattgtggccgccaagctgctggag
gcgtaccacaagccggtgtacatcgtggcgcagggcaagggcagcgtccgcagcacgccc
ggcatctcggcggtgggcggcctgcaccacgccgccgacctgctgcacaaatacggcggg
catccgggggctgccggcttctcgctgcgcgacggccagtatccggcgctgcgcgagcgg
ctgcacgactacgcccggcagtttccgcgcccggtgccgctgctgaccctggacgcgggc
ctaccggtgtcgctggtaacgcccgccttcgccgaggagatcgcgcgcttcgagccgttc
ggggagggcatggccgcgccgctgtggcacctgcacggcgaactggagcagccccggctg
gtgggcaagacgtccggcaccctgcagttcacgctggagggcgtgcgcggcgtgaagtac
cgcgaggcgcagctgccgaccggcctgcgtgacctggcggccaccatccagcagaacgaa
ttccggggccgggtccgcaccgagctgatgctggagggcctgcgcccggcggcgccgctg
gacctggccggtgagggggcgtcctcgctctccctgccgcgcctggaccccaagtctgcc
atgcagcacctgcgggcgggcgccaacgcctatgccgagggcaaggtggccgagtacctg
accgagaacattcccggcgtgcagctgctggggccagacgcccggctgagcggcgaggtg
gtgctgtatggcctgccgccggaagacacgctgggccgctggctggccgcagctgcggcc
ggtactggacgggtcagttttgcctgggggccgcgcacgctggacgatctgggcggatac
accgggcgggaacgcggcgcgccggcgcaggcggccgcgtaccggcgctggcagtgggcg
cacctgtaccgccacctcagcgacgagggctggaccgaggccgcgctgaagatgcagggc
gtggcactgccggtggaagtggcgggcgtggcggactga
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