Deinococcus sonorensis: ABOD76_15065
Help
Entry
ABOD76_15065 CDS
T10415
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dsc Deinococcus sonorensis
Pathway
dsc03420
Nucleotide excision repair
dsc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABOD76_15065
03430 Mismatch repair
ABOD76_15065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsc03400
]
ABOD76_15065
Enzymes [BR:
dsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABOD76_15065
DNA repair and recombination proteins [BR:
dsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABOD76_15065
MMR (mismatch excision repair)
Other MMR factors
ABOD76_15065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Costars
DUF4566
Motif
Other DBs
NCBI-ProteinID:
XBV84756
UniProt:
A0AAU7U8F1
LinkDB
All DBs
Position
complement(2005090..2007315)
Genome browser
AA seq
741 aa
AA seq
DB search
MTSGSDLLSQLNPNQAEAADHFRGPALVIAGAGSGKTRTLIYRIAHLIQHYGVDPGQILA
VTFTNKAAAEMRERASHLIQGADRLWISTFHSAGVRILRAYGEYIGLRRGFVIYDDDDQL
DVLKEVMGTVPGIGPDTNPRVLRSILDRAKSNLLSPGELERQAERYISGVPKEAAAEVYR
RYEARKKAQNAIDFGDLITETVRLFQEVPGVLERVQDRAVFIHVDEYQDTNKAQYELTRL
LASRDRNLLVVGDPDQSIYKFRGADIQNILDFQKDYPDARVYRLEHNYRSSARVLGLANQ
LIENNTERLEKTLKPVKEDGHPVMFHRANDHRGEGDFVAEWVTRLHHEGRKFSEIAILYR
TNAQSRVIEESLRRGSIPAKIVGGVGFYDRREIRDILSYARLSINPSDDVALRRIIGRPK
RGIGDTALAKLAEWAQINRTSLLAACAHGEEILDRGGSKPVEFARLMQAFAEAADVYSPG
GFLRYAIESSGYVDLLRQEGQEGAVRLENLEELVNAAEEWSQEHEGGTIQDFLDDAALLS
SVDDMRAKQENKNVPEDSVTLMTLHNAKGLEFPAVFIVGAEEGLLPSKNSLVEPGGIEEE
RRLFYVGITRAMERLFLTAAQNRMQYGKTNSSEDSRFLEEIQGGFDTVDQYGQAQEYRQK
TWRDYRPTVPARPTAPSAVKNTSPLTGELAYRGGEQVTHPKFGAGQVLAVAGVGDRQEVT
VHFASAGTKKLLVKFASLSRA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
gtgacttccggcagtgatctcctctctcaactcaaccccaatcaggcggaggccgccgac
cactttcgcggcccggcgctggtgatcgcgggggccggcagcggcaagacccgcaccctg
atctaccgcatcgcccacctgatccagcactacggcgtggacccgggccagatcctggcc
gtgaccttcaccaacaaggccgccgccgagatgcgcgagcgggccagccacctgattcag
ggcgccgaccggctgtggatcagcaccttccactcggcgggcgtgcggattcttcgcgcc
tacggggagtacatcggcctgaggcgcggcttcgtgatctacgacgacgacgatcagctg
gacgtgctcaaggaggtaatgggcaccgtgccgggcatcggccccgacaccaacccgcgc
gtgctgcgcagcattctggaccgggccaagagcaacctgctgagccccggtgaactggag
cggcaggccgagcgctacatctccggcgtcccgaaggaagcggcggccgaggtgtaccgc
cgctatgaggcgcgcaagaaggcccagaacgccatcgacttcggtgacctgatcaccgag
acggtgcggctgtttcaggaggtgccgggcgtgctggagcgggtgcaggaccgggccgtg
ttcattcacgtggacgagtaccaggacaccaacaaggcccagtacgagctgacccggctg
ctggccagccgcgaccgcaacctgctggtggtgggcgacccggaccagagcatctacaag
ttccgcggcgccgacatccagaacatcctggacttccagaaggactacccggacgcgcgc
gtgtaccgcctggagcacaactaccgcagctcggcgcgggtgctggggctggccaaccag
ctgatcgagaacaacaccgagcggctggagaagaccctcaaaccggtcaaggaggacggc
cacccggtgatgttccaccgggccaacgaccaccgcggcgagggcgacttcgtggccgaa
tgggtcacgcggctgcaccacgagggccgcaagttctcggagatcgccatcctgtaccgt
accaacgcccagtcgcgcgtgatcgaggagagcctgcggcggggcagcattccggccaag
atcgtgggcggcgtgggcttctacgaccgccgcgagatccgcgacatcctgtcgtatgcc
cgtctgagcatcaacccttcggacgacgtggcgctgcggcgcatcatcgggcggcccaaa
cgcggcatcggggacacggcgctggcgaaacttgccgagtgggcgcagatcaaccgcacc
agcctgctggccgcctgcgcccacggcgaggagattctggaccggggcggcagcaagccg
gtggagtttgcgcggctgatgcaggcgttcgcggaggccgccgacgtctactcaccgggc
ggcttcctgcgctacgccatcgagtcgagcggctacgtggacctgctgcgccaggagggg
caggagggcgcggtgcggctggagaacctggaggaactggtaaacgccgccgaggagtgg
tcccaggagcacgagggcggcaccatccaggacttcctggacgacgcggcgctgctgtcc
agcgtggacgacatgcgcgccaagcaggaaaacaagaacgtgccggaggacagcgtgacg
ctgatgacgctgcacaacgccaaggggctggagttcccggcggtgttcatcgtgggcgcc
gaggaggggctgctgcccagcaagaactcgctggtggaaccgggcggcatcgaggaggag
cggcggctgttctatgtcggcatcacccgcgcgatggaacggctgttcctgacggcggcc
cagaaccgcatgcagtacggcaagaccaactcctccgaggactcgcgtttcctggaagag
attcagggcggcttcgacacggtggaccagtacggtcaggcccaggagtaccgccagaag
acctggcgcgactaccgcccgaccgttccggcgcggcccactgcgcccagcgcggtcaag
aacaccagtccgctgaccggcgagctggcctaccggggcggcgaacaggtcacgcacccc
aagttcggggctggacaggtgctggcggtggcgggtgtgggcgaccggcaggaggtgacg
gtccactttgcgtcggccggcaccaagaaactgctggtcaagttcgccagcctcagccgc
gcgtaa
DBGET
integrated database retrieval system
