Deinococcus sonorensis: ABOD76_16650
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Entry
ABOD76_16650 CDS
T10415
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dsc Deinococcus sonorensis
Pathway
dsc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABOD76_16650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsc03400
]
ABOD76_16650
Enzymes [BR:
dsc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ABOD76_16650
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ABOD76_16650
DNA repair and recombination proteins [BR:
dsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABOD76_16650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DZR
Zn_ribbon_6
DUF7573
Motif
Other DBs
NCBI-ProteinID:
XBV85056
UniProt:
A0AAU7U9A5
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All DBs
Position
2323982..2324788
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AA seq
268 aa
AA seq
DB search
MPELPEVETTRRKIEPYLKGRQLIRLEHDAPHRYRQTHLAHGRTVSGLGRRGKYLLIHLD
DAGEAPLELIVHLGMTGGFRFDATPHTRVTLHTDQGQLYFQDARRFGKMAVVTPGEYASM
PTLARMGPEPLSEAFLELDFVQAAARAGAVKPWLLSQQPVAGVGNIYADESLWRARIHPA
QTRLTPDEALRLYQAIRTTMAEAVEAGGSTLSDGTYQQPDGISGLFQVHHNVYDRAGQPC
PRCGTPIQKTVLAQRGTHFCPHCQVLRG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
gtgccagaactgccggaagtcgagaccacccgccgcaagattgagccgtacctgaagggc
cgccagctgatccggctggagcacgacgccccgcaccgctaccgtcagacgcatctggcg
cacggccgcaccgtgtcgggcctgggccggcgcggcaagtacctgctgattcacctggac
gatgctggtgaggcgccgctggaactgatcgtgcatctggggatgaccggcggcttccgc
tttgacgccacgccgcacacccgcgtcacgctgcacaccgatcagggccagctgtacttt
caggacgcgcggcgcttcggcaagatggcggtcgtgacgcccggcgagtatgccagcatg
cccaccctggcccgcatggggcccgagccgctgtcggaggcgtttctggagctggacttc
gtgcaggcggcggcgcgggccggggcggtcaagccatggctgctgtcgcagcagccggtg
gccggcgtgggcaacatctacgccgacgagagcctgtggcgcgcccgcattcacccggcc
cagacgcgcctcacgccggacgaggcgctgcggctgtaccaggcgatccggaccaccatg
gccgaggcggtggaggccgggggcagcaccctctcggacggcacctaccagcagccggac
ggcatcagcgggctgttccaggtgcatcacaacgtctacgaccgggccgggcagccgtgt
ccgcgctgcgggacgcccatccagaagacggtgctggcccagcgcggcacccatttctgc
ccgcactgtcaggtgctgcgggggtaa
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