Deinococcus sonorensis: ABOD76_18125
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Entry
ABOD76_18125 CDS
T10415
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dsc Deinococcus sonorensis
Brite
KEGG Orthology (KO) [BR:
dsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsc03400
]
ABOD76_18125
DNA repair and recombination proteins [BR:
dsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABOD76_18125
Archaeal homologous recombinant proteins
ABOD76_18125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
XBV85331
UniProt:
A0AAU7UBI7
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All DBs
Position
complement(2627447..2630191)
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AA seq
914 aa
AA seq
DB search
MRPLALSVQGFMPFRAPQHLSFDGLDLFAIVGPTGSGKSALLDAMTFALYGRTPRLGGSG
MEALISQGASGCAVELEFEVRGQRYRVARSRGRKSSGNQVKFEQWLAPEGRWQNLSTDSK
VAQTDARIEEAVGLDYTAFTRAVLLPQGEFSSFLKGKNADRQKLLGELMNMSEVADMAKF
ARDRTRQLDLELKGAQTRLEREYGDISPEVLAGWQADQVAAHTRIETLDEQRGQLTLSVQ
RLREVQQSWSTIQRLQAGVQRLEQQAGAVREGAERAAAARRVAGVLPLLDVATRAEQAAA
RAAGELRRQQADAAEARRTVEAATARLTTAETQAAGIPALRQRSEQLREGEALAQRLRRA
GGRPDAQHAQPLPWDEEQHAEAHAAAERQKRNSLERVQLDAARSAHERRAADLATEELTQ
RRELAELERLKGEGVRLKQDADATKARLTEAEAHAGVQAFRHLLHLGEPCPLCEQGVQHL
PSTPAPDLSPLRDQLARQEQTLETLRERCKQLMAETRVRARTLAEGQQQLQEERQHLQAR
EQDLQLAEASVTGQPAELAARLLAGLAGLVRQAGPDPAAALRRCQEQIEQLGQAVEAARV
ALARASSTLSGAEARLEAAQVVASDRQQEGEAARHAAQSGLTELRLSEAEARAAALPEAQ
IAAFEEAVQQHQQERVRLEAELREQQRKLGGQDHDPAALGAAERKLAATETELNAAREHA
GRLAEQLRSGRERLARKGELEAEAQRTSSQLDTWKTLSGSLAVGEFQQYLLQEVESRLLS
GAGQLLYDISDQRYRLGLQDGDYVVQDLWNAGEARAVRTLSGGETFLASLSLAIALSDYL
AGNQVLGALFLDEGFGTLDPQALEAVAGALENLRTSGRMVGVITHIESLSERLPVHLLVS
KSTLSGSTVQRLDT
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
gtgaggccgctggccctcagcgtgcagggcttcatgccgttccgcgctccgcagcacctg
agcttcgatggcctggacctgttcgccatcgtcggtccgaccggcagcggcaagagtgcg
ctgctggacgccatgacgtttgcgctgtatggccgcacgccccggctgggcggcagcggc
atggaggccctgatcagccagggggccagcggctgcgcggtggaactggagttcgaggtg
cgcgggcagcgctaccgggtggcgcgcagccgcggccgcaagtcgtccggcaatcaggtg
aagttcgagcagtggctggccccggagggccgctggcagaacctcagcaccgacagcaag
gtggcccagaccgacgcccgcatcgaggaggcggtgggcctggactacaccgccttcacg
cgggccgtgctgctgccgcagggcgaattcagcagcttcctgaaaggcaagaatgccgac
cggcagaagctgctgggcgagctgatgaacatgtcggaggtggcggacatggccaagttt
gcgcgcgaccgcacccggcagctggacctggagctgaagggcgcccagacccggctggaa
cgcgaatacggcgacatcagccccgaggtgctggccggctggcaggccgatcaggtggcc
gcccacacccgcatcgagacgctcgacgagcagcgcggtcagctgaccctgagcgtgcag
cggctgcgcgaggtgcagcagtcgtggagcaccatccagcggctgcaggcgggcgtgcag
cggctggagcagcaggcgggcgcggttcgcgaaggtgcggagcgtgctgccgcggcccgg
cgggtggccggcgtgctgcccctgctggacgtggccacccgtgccgaacaggcggcggcc
cgtgcggccggtgagctgcgccgacagcaggcggacgcggccgaggcgcggcggacggtc
gaggcggccacagcccgtctgaccaccgccgagacgcaggcggcggggattccggcgctg
cgtcagcgctcggagcagctgcgggaaggtgaggcgctggcgcagcggctgcggcgggcc
ggtggccgaccggacgcccagcacgcccagccgctcccctgggacgaggagcagcatgcc
gaggcgcacgcggcggccgagcgccagaagcgcaacagtctggagcgggtgcagctggac
gccgcccgctccgcccacgagcgccgcgccgccgacctggccaccgaggagctgacccag
cgccgagagctggccgaactggagcggctgaagggcgagggcgtacggctgaagcaggac
gccgacgcgaccaaagcgcggctgaccgaggcggaggcccacgccggggtgcaggccttc
cgccacctgctgcacctgggtgagccgtgtccgctgtgtgagcagggcgtgcagcacctg
ccgtctaccccagcgccggacctcagcccgctgcgcgatcagctggcgcggcaggagcag
accctggaaacgctgcgcgagcgctgcaaacagctgatggccgagacgcgggtgcgtgcc
cgtacgctggccgagggacagcagcagctgcaggaggagcggcagcacctgcaggcccgc
gaacaggacctgcagctggccgaggccagcgtcaccggtcagccggccgagctggcggcc
cggctgctggcgggtctggccgggctggtgcggcaggcaggcccggacccggcggcggcc
ctgcggcgctgccaggagcagatcgaacagctgggacaggcggtcgaggcggcgcgtgtg
gcgctggcccgggccagcagcacgctgagcggcgccgaggctcgcctggaggcggcccag
gtggtggccagcgaccggcagcaggagggggaggccgcacgccacgccgcccagtctggc
ctgaccgagctgcggctcagcgaggcggaggcgcgggcggcggcgctgccggaagcgcag
attgcggctttcgaggaggcggtgcagcagcaccagcaggaacgggtgcggctggaggca
gagctgcgggagcagcagcgcaaactgggcggccaggaccatgatccggccgcgctgggg
gccgccgagcgcaaactggccgccaccgagaccgagctgaacgccgcccgcgagcatgcc
gggcggctggccgaacagctgcgctcggggcgggagcggctggcgcgcaagggtgagctt
gaggccgaagcgcagcgcacctcgtctcagctcgatacctggaagacgctctccggcagt
ctggcggtgggcgaattccagcagtacctattgcaggaggtggaatcgcggctgctgtcc
ggtgcgggccagctgctatacgacatcagcgaccagcgctaccggctggggctgcaggac
ggcgactacgtggtgcaggacctctggaacgccggtgaggcccgggccgtgcgcacgctg
tcgggcggcgagacctttctggccagtctgagcctcgccatcgcgctgagcgactacctg
gctggcaatcaggtgctgggcgcgctgtttcttgacgagggcttcggcacgctggacccg
caggcgctggaggcagtggccggcgcgctggagaacctgcgcaccagtggccggatggtg
ggcgtcatcacccacatcgaaagcctgtcggagcggctgccggtgcacctgctggtcagc
aagagcaccctgagcggcagcaccgtgcagcggctggacacctga
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