Deinococcus sonorensis: ABOD76_18160
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Entry
ABOD76_18160 CDS
T10415
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dsc Deinococcus sonorensis
Pathway
dsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABOD76_18160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsc03400
]
ABOD76_18160
Enzymes [BR:
dsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABOD76_18160
DNA repair and recombination proteins [BR:
dsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABOD76_18160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
OB_YrrC
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
nSTAND3
AAA_16
AAA_28
AAA_25
TraI_hel_assoc_N
PhoH
NPHP3_N
NTPase_1
AAA_5
KTI12
AAA
AAA_18
TsaE
Motif
Other DBs
NCBI-ProteinID:
XBV85338
UniProt:
A0AAU7UAC8
LinkDB
All DBs
Position
2636361..2638466
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AA seq
701 aa
AA seq
DB search
MAAPHSDVHAPVQLRVTGSVNKVRFRAESGFTVALARLKNEEGEDPDATLVGLMPPIEVG
DTFSADVVMEEHREYGYQYRVLNLILEAVPADLTPEGVAAYLEARVDGVGKVLAGRIARH
FGAGTFDVLGSEPQLLLQVPGVTQSTLHKMVQSWSSQGSERRLLAGLQGLGLSISQAQKA
LKHFGEPALDHLQQDLYALTEVEGIGFLTADRLAQAQGVPQDDPRRLTAAAVYALQQAAL
QGGHSYLPRERAVKGIMHYTRVGLPQAQLALDNALEFSRLKDDDGRIYLPHALRAERKLA
QTIRVLLATPPAEAWEVRDNAARGLDDAQAQVLELLRDQRLVVLTGGPGTGKSTTTRRVA
DLAEALGLDVGLCAPTGKAARRLGELTGRTASTIHRLLGYGPGGFRNNHLEPVMHDLIIV
DEVSMCGDALMLSLLSAVAPGARVLLVGDVDQLPPVDAGLPLMALTQAAPTIRLQKVYRQ
AAQNPIIAAAHGLQHGEAPQWGDARLSQVAVEPDGGARRVALLVRELGGPSQVQVLTPMR
KGPLGVEMLNHHLQGIFNPGEGGTRIADGEARPGDVVVQTKNDYQNEVFNGTLGTVLSAG
PGRLQVDFDGNVVELSGAELFNLTLGYALTVHRAQGSEWGTVLGVLHEVHAPMLSRNLAY
TALTRARERFVAAGSTRAWEVAARRQREERCTHLLERIRSA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccctcactctgatgtccacgctccggttcagttgcgcgttacgggcagcgtc
aacaaggtgcgcttccgggccgaaagcggcttcacggtggcgctggcccgcctgaagaac
gaggagggcgaggacccggacgccaccctggtgggcctgatgccgcccatcgaggtgggt
gacaccttcagtgccgacgtcgtgatggaagaacaccgcgagtacggctaccagtaccga
gtgctgaacctgatcctagaggcggtgccggcagacctcacgccggagggcgtggctgcc
tacctggaagcgcgggtggatggggtgggcaaggtgctggccgggcgcatcgcgcggcat
ttcggggccggcaccttcgacgtgctgggcagcgagccgcagctgctgttgcaggtgccg
ggcgtgacccagagcaccctgcacaagatggtccagagctggagttcccagggctcggaa
cggcggctgctggcggggctgcagggcctgggcctgagcatctcgcaggcgcagaaggcg
ctgaaacacttcggagagccggcgctcgaccacctgcagcaggacctgtacgccctgacc
gaggtggaaggcatcggcttcctgacggccgaccggctggcgcaggcccagggcgtgccg
caggatgacccgcgccgcctgacggccgccgccgtgtacgcattgcagcaggcggcgctt
cagggcggccacagctacctgccgcgcgagcgggcagtgaagggcatcatgcactacacc
cgcgtggggctgccgcaggcgcagctggcgctggacaacgcgctggagttctcccgcctc
aaggacgacgacgggcgcatctacctgccgcacgccctgcgcgccgagcgcaagctggcc
cagaccatccgcgtgctgctggccaccccgcccgccgaggcctgggaggtccgggacaac
gctgccagagggctggacgacgcccaggcacaggtgctggaactgctgcgcgaccagcgg
ctggtggtgctgaccggcggccccggcaccggcaagtccaccaccacccggcgggtggca
gatctggcggaggcgctgggcctggacgtgggcctgtgcgcgcccaccggcaaggcggcg
cggcggctgggcgagctgaccgggcgcaccgccagcaccatccaccggctgctcgggtac
ggccccggcggcttccggaacaaccacctggaaccggtgatgcacgacctgatcatcgtg
gacgaggtgagcatgtgcggcgacgcgctgatgctgtcgctgctgtcggcggtggccccg
ggcgcgcgggtgctgctggtgggcgacgtggaccagttgcccccggtggacgcggggctg
cccctgatggcactcacccaggctgcccccaccatccggctgcagaaggtctaccgtcag
gcggcccagaacccgatcatcgcggcggcgcacggcctgcagcacggcgaggcgccgcag
tggggcgacgcccgcctgagtcaggtggcggtggaaccggacggcggggcgcggcgggtg
gcgctgctggtgcgcgaactgggcgggccttcacaggtgcaggtgctgacgcccatgcgc
aagggaccactgggcgtggagatgctcaaccaccacctgcagggcatcttcaaccccggc
gaaggtggtacccgcatcgcggacggtgaggcccggccaggcgacgtggtggtgcagacc
aagaatgactaccaaaacgaggtgttcaacggcacgctcggcacggtgctgagtgccggg
ccgggccgcctgcaggtggactttgacggcaacgtggtggaactgagcggtgccgagctg
ttcaacctgacgctcggctacgccctgaccgttcaccgcgcccagggcagcgagtggggc
accgtgctgggcgtgctgcacgaggtccacgcgccgatgctcagccgtaacttggcctac
accgccctgacccgcgcccgcgagcgcttcgtggcggccggatccacccgcgcctgggaa
gtggctgcccgccgccagcgcgaggagcgctgcacacatctgctggaacggattcgcagc
gcatag
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