Desulfolutivibrio sulfodismutans: GD606_03385
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Entry
GD606_03385 CDS
T06784
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
dsd
Desulfolutivibrio sulfodismutans
Pathway
dsd02020
Two-component system
dsd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dsd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GD606_03385 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GD606_03385 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsd03021
]
GD606_03385 (rpoN)
Transcription machinery [BR:
dsd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GD606_03385 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Crp_2
PWI
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
QLA11385
LinkDB
All DBs
Position
714197..715630
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AA seq
477 aa
AA seq
DB search
MALELRQQLKLSQQLVMTPQLQQAIKLLQLSRLELMESIQQELMENPLLEEVLEEEKGDR
QIADDDHAPKSGGDDTAIEKELIKNAEWDDYLGDFASTPVQSHLRETEIPEDGMAFDARL
SSKPSLEGHLDWQMRLSNFTKKELAIGEAICGSLDSSGYLAATAEELAHMTGTTPEEVEA
ALYKVQRLDPVGVAARSPRECLLVQMEVLGLDDPILVEMVSEHLEDLEARRYKPLVKKFK
ITMEELKVYLDTIQSLNPLPGASFGSSEPIFVSPDAYIYKYGDDFIILLNEDGMPRLQLN
SMYLEDVIPKGDKDRDYIQDKKRSAEWLMKSLYQRQRTLYKVLESIVKFQRGFFEEGVNK
LRPLILKDVAEDISMHESTVSRITSNKYTATPHGIFELKFFFNSSLELDDGSTVGSESVK
ATIRQLIAAEDPKKPISDEAIADILKERLQINIARRTVAKYRTAMDIASSSKRKEMF
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggaactgcggcaacaactgaaactttcgcagcagttggtgatgactccccaa
ctgcagcaggccatcaagcttctgcaactgtccaggctggagctcatggagagcatccag
caggaattgatggaaaatccccttctggaagaagttctggaggaggagaagggcgaccgg
cagattgccgacgacgatcacgctcccaagtccggcggcgacgataccgccatcgaaaag
gaactgatcaaaaacgccgaatgggacgactacctgggcgatttcgccagcacgccggta
cagtcccacctccgcgagacggaaatccccgaggacggcatggcctttgacgcccgcctt
tcctccaagccctccctggaaggccatctggactggcagatgcgcctgtcgaacttcacg
aaaaaagaactggccatcggcgaggccatctgcggaagtctggattcctcgggatatctg
gcggctacggccgaggaactggcccacatgaccgggaccaccccggaagaggtggaggct
gcgctgtacaaagtgcagcggttggaccccgtcggggtggccgcccggagccctcgcgaa
tgcctcttggtgcagatggaggttttgggcctggacgatcccatccttgtcgagatggtc
tcggagcatctggaagacctggaggcccgccgctacaagcccctggtgaagaagttcaaa
atcaccatggaagagctcaaggtctatctggacaccattcagagcctcaaccccctgccg
ggcgcgagtttcggctcaagcgagcccatcttcgtcagtcccgacgcctacatctacaag
tatggcgacgatttcatcatcctgctcaacgaggacgggatgccgcgtctccagctcaat
tccatgtatctcgaagatgtcatccccaagggagacaaagaccgggactacatccaggac
aagaagcggtcggcggagtggctcatgaagagcctctaccaacgccaacgcaccctttac
aaggttcttgagagcattgtaaaatttcagaggggtttttttgaagaaggcgtgaacaaa
ttgcggccgctcatcctcaaagatgtggctgaagacatcagcatgcatgaatccaccgtg
agccgcatcacgtccaacaagtatacggctacgccccacggcatctttgagctcaagttc
tttttcaacagctcgcttgaactcgacgatggcagcaccgtgggttcggaatcggtcaag
gccaccatccggcagcttatcgccgccgaagacccgaaaaaacccatcagcgacgaggcc
atcgcggacatcctcaaggagcggttgcagatcaacatcgcccgccgcaccgtggccaaa
taccggacggccatggacatcgcctcgtcatccaagcgcaaggaaatgttctga
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