Desulfolutivibrio sulfodismutans: GD606_03615
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Entry
GD606_03615 CDS
T06784
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
dsd
Desulfolutivibrio sulfodismutans
Pathway
dsd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dsd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GD606_03615 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsd03021
]
GD606_03615 (rpoD)
Transcription machinery [BR:
dsd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GD606_03615 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Exonuc_VII_L
Sigma70_ner
Motif
Other DBs
NCBI-ProteinID:
QLA11428
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All DBs
Position
complement(765117..766883)
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AA seq
588 aa
AA seq
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MSNLKEIQQIKSLIVKGKQKGFLTIDEVNKALPSEVNNPEQIEEVISIFDQLDINIVDSD
KDARKLDTLTAEPDDTPDADLELTESEDSLDYSSRSTDPVRMYLREMGAVPLLDRDGEVT
IAKKIENGEMDVLYALVEVPVAIEELVQVGDDLRLGRMKLKDVVKTIEEDDPSEDEMNQR
QRVIFLLEEIRAIYRKKRKIYGKLDQCACLSRRVYGIQKEIMVYKDEVVGRLRDIKLEKT
LIDRVIETVEDYVRQMHNCQRDLSAYILSVGKSQSEIQEIFSRLDQRNINPVLAADSLGL
TVEELFSFKEMLTAKMEILVRLQDKCCHHVHDLEEVLWRIKRGNTAAQRAKQELIRSNLR
LVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYQRGYKFSTYATWWIRQAITRAIAD
QARTIRIPVHMIETINKLIRTSRYLVQELGRDPTPEEIAERMDYPLEKVKKVLKIAKEPI
SLETPIGDEEDSSLGDFIEDKKALAPAEEVVNTKLGEQIGKVLSDLTPREEQVLRKRFGL
GEKSDHTLEEVGKLFNVTRERIRQIEAKALRKLRHPVRSQHLRSYYES
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatctcaaggaaattcagcagatcaagagcctcatcgtcaagggcaaacaaaaa
ggctttttgaccattgatgaggtcaacaaggctctgccttccgaggtcaataatcccgag
cagatcgaggaggtcatctccatattcgatcagctcgacatcaatatcgtggattcggac
aaggacgcccgcaagctcgacaccctgaccgccgagcccgacgacaccccggacgccgac
ctggaactcaccgagagcgaagattccctcgattattcctcgcgcagcaccgaccccgtg
cgcatgtatctgcgcgagatgggcgcggtgcccctgcttgatcgcgacggcgaggtgacc
atcgccaagaagatcgaaaacggcgagatggacgtgctctacgccctggtcgaggtgccc
gtggccatcgaggagctggtccaggtgggcgacgacctgcgtctgggccgcatgaagctc
aaggatgtggtcaagaccatcgaagaggacgacccctccgaggacgagatgaaccagcgg
cagcgggtcatcttccttctggaggagattcgggccatctatcgaaaaaagcgcaagatc
tacggcaagctggaccagtgcgcctgtctgtcccggcgggtctacggcatccagaaggag
atcatggtctacaaggacgaggtggtggggcgtctgcgggacatcaagctggaaaagacc
ctcatcgaccgggtcatcgagaccgtggaggactacgtgcggcagatgcacaactgccag
cgtgatctgtcggcctacattctgtccgtgggcaaatcccagtccgagatccaggagatt
ttcagcaggctcgaccagcgcaacatcaatcccgtgctggccgccgacagcctgggactg
acggttgaggagcttttctccttcaaggagatgcttacggccaagatggagattctcgtc
cgcctccaggacaagtgctgccaccacgtccacgacctggaagaggtgctgtggcgcatc
aagcgcggcaacacggcggcccagcgggccaagcaggagctgatccgctccaacctgcgc
ctggtggtgtccatcgccaagaaatacaccaaccgcggcctccagttcctggacctcatc
caggaaggcaacatcgggctcatgaaggccgtggacaagttcgaatatcagcgcggctac
aagttctccacctacgccacctggtggatccggcaggccatcacccgggccatcgccgac
caggcccggaccatccgcatccccgtgcacatgatcgagaccatcaacaagctgatccgc
acctcgcgctacctggtgcaggagcttgggcgcgaccccaccccggaggagatcgccgag
cgcatggactatcccctggagaaggtcaaaaaagtcctcaaaatcgccaaggagcccatc
tccctggaaactcccatcggcgacgaggaggattccagcctgggcgatttcatcgaggac
aaaaaggccctggccccggccgaagaggtggtcaacaccaagctcggcgagcagatcggc
aaggtgctctcggacctgaccccgcgcgaggaacaggtcttgcgcaagcgtttcgggctg
ggggaaaagtccgaccacaccctggaagaggtgggcaagctcttcaacgtcacccgggag
cgcatccgccagatcgaggccaaggccctgcgcaagctgcgccatcccgtgcgcagccag
catctgcgttcctattacgaaagctag
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