Desulfolutivibrio sulfodismutans: GD606_05180
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Entry
GD606_05180 CDS
T06784
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dsd
Desulfolutivibrio sulfodismutans
Pathway
dsd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GD606_05180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsd03021
]
GD606_05180
03019 Messenger RNA biogenesis [BR:
dsd03019
]
GD606_05180
Transcription machinery [BR:
dsd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GD606_05180
Messenger RNA biogenesis [BR:
dsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GD606_05180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
Fan1_SAP
AAA
NACHT
ATPase_2
AAA_14
AAA_25
AAA_2
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QLA11705
LinkDB
All DBs
Position
1093076..1094323
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AA seq
415 aa
AA seq
DB search
MNLSELKLKSMPELMELATTYNVENPSGMRKQELIFGILQNCASQNGSIFGEGVLEILPD
GFGFLRSPMYSYMPGPDDIYVSPSQIRRFGLRKGDVISGQIRPPKEGERYFALLRVGEIG
FAPPEASKNLVLFDNLTPLYPNQRFVMENGGENYSSRVIDLLAPIGHGQRGLIVAPPRTG
KTMLLQTIANSINANHPEAYLIVLLIDERPEEVTDMERTVRAEVVSSTFDEPPQRHVQVA
EMVSEKAKRLVERKRDVVILLDSITRLGRAYNAVTPSSGRVLSGGLDANALQRPKRFFGA
ARNIEGGGSLTIIATALIDTGSRMDEVIFEEFKGTGNMEIYLDRHLAEKRVFPAIDMNRS
GTRKEELLLPEDVLNRVWILRKLLAPMNPIDSMEFLLGKMRGSKNNREFLDLMNR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttcggaactgaaactcaaaagcatgcccgagctcatggagctcgcaaccacc
tacaacgtcgagaatccgagcggcatgcgcaagcaggagttgattttcggcatcctgcaa
aactgcgcctcgcaaaacggctcgatcttcggcgaaggggttctggagattctgcccgac
ggattcggtttcctgcgctcccccatgtacagctacatgcccgggcccgacgacatctat
gtctcgccgtcccagatccgccgcttcggcctgcgcaagggcgacgtcatctccggccag
atccgcccccccaaggagggcgaacgttatttcgcgcttctgcgcgtgggcgaaatcgga
ttcgcgcctcccgaggcctcgaaaaacctggtgctcttcgacaacctgaccccgctgtat
cccaaccagcggttcgtcatggaaaacggcggcgaaaactattcctcccgggtcatcgac
cttttggcccccatcggccacggccagcgcgggctcatcgtggccccgccgcgcaccggc
aagaccatgctgctccagaccatcgccaactccatcaacgccaaccatcccgaggcctac
ctcatcgtgctgctcatcgacgagcgtcctgaggaagtcacggacatggaacgcaccgtg
cgggccgaggtggtcagctccaccttcgacgaaccgccccagcgccacgtccaggtggcc
gagatggtcagcgagaaggccaagaggctggttgagcgcaaacgcgacgtggtcatcctg
ctcgacagcatcacccgcctgggccgggcctacaacgccgtgaccccctcctccggccgg
gtgctctccggcggcctggacgccaacgccctgcaacggcccaaacgctttttcggcgcg
gcccgcaacatcgagggcggcggctccctgaccatcatcgccacggcgctcatcgacacc
ggttcgcgcatggacgaggtcatcttcgaggagttcaagggcacgggcaacatggagatc
tatctggaccgccatctcgcggaaaagcgcgtgttcccggccatcgacatgaaccgctcc
ggcacccgcaaggaagaactgctgctcccggaagacgtgctcaaccgggtgtggatcctg
cgcaagcttttggcccccatgaaccccatcgacagcatggagtttctgctgggcaagatg
cgcggcagcaaaaacaaccgcgaatttctggacctcatgaaccgctag
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