Desulfolutivibrio sulfodismutans: GD606_06680
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Entry
GD606_06680 CDS
T06784
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dsd
Desulfolutivibrio sulfodismutans
Pathway
dsd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GD606_06680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsd03400
]
GD606_06680
Enzymes [BR:
dsd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GD606_06680
DNA repair and recombination proteins [BR:
dsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GD606_06680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
SLFN-g3_helicase
AAA_22
Helicase_RecD
nSTAND3
PIF1
AAA_16
UvrD-helicase
NTPase_1
TsaE
AAA_28
Mg_chelatase
PhoH
AAA
T2SSE
MeaB
Thymidylate_kin
AAA_18
CbiA
Zeta_toxin
DEAD
RsgA_GTPase
AAA_5
AAA_17
6PF2K
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QLA11971
LinkDB
All DBs
Position
complement(1407402..1409585)
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AA seq
727 aa
AA seq
DB search
MTVTEIAAEVQCITYYSEETNYLVARVKAKGEPGVVSIVGAMAKLAPGEMVRLTGQWVEH
PRFGRQFQVQSAVSSMPATVNGIRRYLASGQIKGVGGVLAERMVDMYGARVLDILENEPD
KLLRVEGLGKKKLSGILSSWSEHREVRSLILFLQTFEISTGYAGKIFKLYGNDAIARLKA
NPYDLIYEIRGIGFRTADRMALKLGLDPGSRDRVEAAVVFSLFTASEQGHLFFPAEELYE
RILGMLDGVIDPITFESALAALEEKKRIKTCPLPEQDIPRAVYLHHLYGYEREIADRLWG
LCTHGGSTGVLEKARGLLPKIEAEAGLTLSEEQRRAVQTAIGEKVFVLTGGPGTGKTTIT
RMVVRALDKLGHKVKLAAPTGRAAKRMSEATGFPAATLHRLLQYSADGSFALSEDNKLKA
DALVVDEASMLDVRLCAQMLRAMPLTGRLILVGDVNQLPSVGPGNVLADILDSQAVPAER
LTHIYRQAQKSLIVVNSHRVNDGQFPLQDRERPEDSDFFWVEMDDPAAVKDKIVELVSER
IPRSFGFDPVRDIQVLSPMHKGEVGTMALNDALRARLNPAGPEIVRGNTIFRRGDKVLQT
RNNYEKDVFNGDLGFITAVDPEEGELLVDFDGRDVAYDRTDLDELSPAYAISVHKSQGSE
YPAVVTPLLTQHYVMLRRNLIYTALTRARKLAVLIAPKRALAVGLGKSGSEKRFTHLRFR
LQEKFNR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtcacggaaattgcggccgaggtgcagtgcatcacctactacagtgaagagacc
aactatctcgtcgcccgggtcaaggccaagggcgaaccgggggtggtgtccatcgtgggc
gccatggccaagctggccccgggcgagatggtgcgcctgaccggccagtgggtcgagcat
ccccgtttcggacgccagttccaggtgcaaagcgccgtctcgtccatgccggccacggtc
aacggcatccggcgctatctggcctcgggccagatcaagggcgtgggcggggtgttggcc
gagcgcatggtggacatgtacggcgcgcgcgtcctggacatcctggagaacgagccggac
aagctgctgcgcgtggagggcctgggcaaaaaaaagctctcgggcatcctctcctcctgg
agcgagcaccgcgaggtgcgttcgcttatcctttttctccagaccttcgagatctccacg
ggctatgccggcaagattttcaagctctatggcaacgacgccatcgcccgcctcaaggcc
aatccctatgacctgatctacgagattcgcggcatcgggtttcgcaccgccgaccgcatg
gccttaaagctcgggctcgatcccggcagccgggaccgggtggaggcggccgtggtgttc
tccctttttacggccagcgagcaggggcatctgttttttccggccgaggagctctacgaa
cggattctgggcatgctcgacggcgtgatcgatcccatcaccttcgagtccgccctggcc
gccctggaagagaaaaaacgcatcaagacctgtccgcttcccgagcaggacatcccccgg
gccgtctatctgcatcacctctacggctacgagcgcgaaatcgccgaccggctgtggggg
ctgtgcacccacggcggcagcaccggggttttggaaaaggcccggggacttttgccgaaa
atcgaggccgaggccgggctgacgctttccgaggagcagcgccgggccgtgcagacggcc
atcggggagaaggtcttcgtgctcaccggcggtcccggcacgggcaagaccaccatcacc
cgcatggtggtgcgcgcccttgacaagctcggccataaagtcaaacttgccgcgcccacc
ggccgggcggccaaacgcatgtccgaggccacgggattcccggcggccaccctgcaccgg
ctcttgcaatattctgccgacggctcctttgccctaagcgaggacaacaagctcaaggcc
gacgcgctggtggtggatgaggcctccatgctcgacgtgcggctgtgcgcccagatgctt
cgggccatgcccctgaccgggcggctgatcctggtcggggacgtgaaccagttgccgtct
gtcgggccgggcaacgtcctggccgacatcctggacagccaggccgtgcccgccgaacgc
ctgacccatatttaccggcaggcccagaaaagcctgatcgtggtcaactcccaccgcgtc
aacgacggccagttccccctgcaggatcgggagcgtcccgaggactcggattttttctgg
gtggagatggacgatccggcggcggtcaaggacaagatcgtggaactggtgagcgagcgc
attccccggtccttcggtttcgatccggtgcgcgacatccaggtgctttcgcccatgcac
aagggcgaggtggggaccatggccttaaacgacgccctgcgcgccaggctcaatcctgcg
ggcccggagatcgtccggggcaacacgattttccggcgcggggacaaggtgctgcagacc
cgcaacaactatgaaaaagacgtgttcaacggcgatctggggttcatcaccgccgtggac
cccgaggaaggggagcttttggtggatttcgacggccgggacgtggcctatgaccgtacg
gacctggacgaactcagcccggcctacgccataagcgtgcataagtcccagggcagcgaa
tatccggctgtggtgacgccccttttgacccagcattacgtcatgctgcggcgcaacctg
atctataccgccctgacccgggccagaaagcttgcggtgctcatcgcccccaagcgggcc
ctggccgtgggcctgggcaaatccgggtctgaaaagcgttttacgcatctgcgtttccgg
ctccaggagaagttcaaccgctag
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