Desulfolutivibrio sulfodismutans: GD606_09475
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Entry
GD606_09475 CDS
T06784
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dsd
Desulfolutivibrio sulfodismutans
Brite
KEGG Orthology (KO) [BR:
dsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsd03009
]
GD606_09475 (rimO)
Enzymes [BR:
dsd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GD606_09475 (rimO)
Ribosome biogenesis [BR:
dsd03009
]
Prokaryotic type
ribosomal protein modification factors
GD606_09475 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
RIM2a_ZnF
Motif
Other DBs
NCBI-ProteinID:
QLA12485
LinkDB
All DBs
Position
2026897..2028225
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AA seq
442 aa
AA seq
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MNHSIKVYSISLGCPKNRVDAEAVLGAVPGGVRIVSDPAQADLVVINTCSFIKPAVEESV
RVILDTAEAIRGLSPRPKLAVTGCLPGRYGEELRAGLPEVDVWGLPSELAELPGRLARAV
SPDGARLPDLRRPSLGTRLVSTPPGYAYVKIAEGCNHACAYCTIPSIRGRLASRPVTDIV
AEAGGLVDRGASELILVAQDLTAYGRDMGGGRGLRELVEGLLPLPGLSRLRLMYLYPSGL
DAGLLDFLAAAGPPLLPYFDIPFQHAHPDVLRAMGRPRSDAPEAIVARVRQRFPEAAIRT
TFITGFPGETPRRFQALLDFVARERLHHVGVFPFSPEEGTRAVALPGKVSGAEARRRRDA
LMELQAEISADILAGYVGKTLPVLVDAPHPEWPGLFVGRTWFQAPEADGVTYVSGPGVAP
GKLVMAEIVESKDYDLVALADG
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaccattcgataaaagtctattccataagccttggctgccccaaaaaccgggtggac
gccgaggccgtgctgggggccgtgcccggcggggtccggatcgtgtccgatccggcccag
gccgacctggtggtcatcaacacctgttcgttcatcaagcccgccgtggaagagtcggtg
cgggtgatcctggacacggccgaggccatccggggactttccccccggccgaaactggcc
gtgaccgggtgcctgccagggcggtacggcgaggaactgcgggccgggctgcccgaggtg
gacgtgtggggactgccgtcggagctggcggagctgcccggacgcctggcccgggcggtg
tcgccggacggcgcacggttgccggacctgcggcggccgtccctgggaacgcggcttgtc
agcacgccgccggggtatgcctatgtgaagatcgccgagggctgcaaccatgcctgcgcc
tattgcaccatcccctccatccgggggcggctggccagccgtccggttacggacatcgtg
gccgaggccggggggctggtggaccggggcgcgtcggaactgatcctggtggcccaggat
ctgacggcctacggccgggatatgggcggcgggcggggacttcgggagctcgtggagggt
cttttgcccctgcccgggctgtcccggctgcggctcatgtacctttatccgtcgggactc
gacgccgggcttctggattttctggccgcggccgggccgccgcttctgccctatttcgac
atccccttccagcacgcccacccggacgtgctgcgggccatgggccgtccccgctcggac
gcgcccgaggccatcgtggcccgggtgcggcagcggtttcccgaggcggccatccgcacc
acgttcatcaccggctttccgggcgagacgccccggcggttccaggcattgctggacttc
gtggcccgggagcggctgcaccatgtgggggtgtttcccttttcgcccgaggagggcacc
cgggccgtggccctgcccggcaaggtctccggggccgaggccaggcgtcggcgcgacgcg
ctcatggagcttcaggccgaaatcagcgccgacatcctggccggatatgtagggaaaacc
ctgccggtcctggtggatgcgccgcacccggaatggcccgggcttttcgtgggccgcacc
tggttccaggccccggaggcggacggcgtgacctacgtcagcggcccgggcgtggccccg
gggaaactggtcatggccgagatcgtggagagcaaggactacgatctggtggccctggcc
gacggctga
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