Desulfolutivibrio sulfodismutans: GD606_12485
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Entry
GD606_12485 CDS
T06784
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dsd
Desulfolutivibrio sulfodismutans
Brite
KEGG Orthology (KO) [BR:
dsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsd03032
]
GD606_12485 (topA)
03400 DNA repair and recombination proteins [BR:
dsd03400
]
GD606_12485 (topA)
Enzymes [BR:
dsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GD606_12485 (topA)
DNA replication proteins [BR:
dsd03032
]
Prokaryotic type
DNA Topoisomerases
GD606_12485 (topA)
DNA repair and recombination proteins [BR:
dsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GD606_12485 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_3
Zn_ribbon_19
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
QLA13023
LinkDB
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Position
complement(2779317..2781578)
Genome browser
AA seq
753 aa
AA seq
DB search
MAKELIIVESPAKVKTIKKFLGSAYAVEASVGHVRDLPTKTLGVDEKKDFAPQYQIIQGK
QKVVSKLREAAAKASRIYLAPDPDREGEAIAWHVAELLKAEDRPIHRIFFNEITAKAVRE
ALTHPREIDEKLFLSQQARRILDRLVGYKVSPLLWKKVKRGISAGRVQSVALRLVVEREK
ERQAFVPEEYWVFKALLAAAEPPVFEAELWKVAGKKPVIGDGETAATLRDAILKSPFAVT
AVAEKERAKSPPPPYITSTLQQAANQRLGFTAKRTMGAAQRLYEGVELGERGTVALITYM
RTDSVRIADEARQAAKDFIVDTLGPEFYPAKARYFKTKASAQDAHEAIRPVDPAVTPDDV
RSFLPREQYALYKLIWERFLASQMAEARFWDTTAEISAGTALFRAKGQRLIFPGYLKVYG
MEAGDEAKTLPPLAQGQPLTLAELKTDQKFTQPPPRYTEASLVRELEEKGIGRPSTYAAI
ISTLIDREYAKLEEKHFVPSELGTTVADLLIDHFATIMDVGFTAGMEAALDEVAEGQRDW
VALLKDFTDGFYPALDKASEDMAAVKAGKETGLVCDKCGQPMVIKFGRMGEFLACSGYPD
CKNTSNFTRTPDGGIELVARQADEPVVMGKCPDCGKDLVLKKSRTGSRFVACSGYPACKH
AEPFKTGVKCPREGCGGELVEKSSKRGKVFYSCDRYPQCDYAVWDWPVAEPCPKCGSGIL
VKKRTQARGEHLACPEKSCRYVRSLDGGETEEQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagagctgatcatcgtcgaatccccggccaaagtgaagaccatcaagaaattc
ctcggcagcgcttatgccgtggaggcctcggtcggccacgtccgcgacctgcccaccaag
accctgggcgtggacgagaaaaaggatttcgcgccgcagtaccagatcatccagggcaag
cagaaggtggtttccaagctgcgtgaggccgcggccaaggccagccgcatctacctggcc
ccggacccggatcgcgagggagaggccattgcctggcatgtggccgaattgctcaaagcg
gaagaccggcccatccaccgcatttttttcaacgaaatcacggccaaggccgtgcgtgag
gccctgacccacccgcgcgaaatcgacgaaaagctgttcttgtcccagcaggcccggcgc
atcctggaccggctggtgggctacaaggtttcgccccttttgtggaaaaaggtcaaacgg
ggcatctccgccggccgggtgcagtccgtggcgcttcggctggtggttgagcgggaaaaa
gagcgccaggccttcgtgcccgaggaatactgggtgttcaaggcccttttggcggccgcc
gaacccccggtcttcgaggccgagctgtggaaggtggctggcaaaaagccggtcatcggc
gacggcgagacggccgccacgcttcgcgacgccattttgaaaagccccttcgcggtcacc
gccgtggccgagaaggaacgcgccaagtccccgccgccgccctacatcacctccaccctg
cagcaggccgccaaccagcgcctggggtttacggccaagcggaccatgggcgcggcccag
cggctgtacgagggcgtggagctgggcgaacgcggcacggtggcgctgatcacctacatg
cgtaccgactccgtgcgcatcgccgacgaggcgcgccaggccgccaaagatttcatcgtg
gacacgcttgggccggagttctatccggccaaggcccgctatttcaagaccaaggcctcg
gcccaggacgcccacgaggccatccggcccgttgacccggccgtcaccccggacgacgtg
cgatcctttctgccccgggagcagtatgccctgtacaagctcatctgggagcgtttcctg
gcctcccagatggccgaggcccggttctgggacaccacggcggagatctcggcgggcacg
gccctgttccgggccaagggccagcggctgatctttccgggctatctcaaggtctacggc
atggaggccggggacgaggccaaaaccctgccgcctttggcccagggacagcccctgacg
ctcgcggagctcaagaccgaccagaagttcacccagccgcccccgcgctatacagaggcc
tccctggtgcgcgagctggaggagaagggcatcggccgtccgtccacctatgcggccatc
atctccacgcttatcgaccgcgaatacgccaagctggaagagaagcacttcgtgccgtcg
gagctgggaaccaccgtggccgacctgctcatcgaccatttcgcgaccatcatggatgtg
gggttcacggccgggatggaggccgccctggacgaggtggccgagggccagcgggactgg
gtggcgcttctcaaggatttcacggacggattttatcccgccctggacaaggcctccgag
gacatggccgcggtcaaggcgggcaaggagacggggcttgtctgcgacaagtgcggccag
cccatggtcatcaagttcggccgcatgggggagttcctggcctgctcgggctatcccgac
tgcaagaacacctcgaatttcacccgcaccccggacggcggcatcgagctggtggccaga
caggccgacgagcccgtggtgatgggcaagtgcccggattgcggcaaggatctggtgctg
aaaaaatcgcgcaccggcagccggttcgtggcctgttcgggatatccggcctgcaagcac
gccgagccgttcaagaccggggtcaaatgcccgcgcgagggctgcggcggggagctggtg
gaaaaaagctccaagcggggcaaggtgttttattcctgcgaccgctacccccagtgcgac
tacgccgtgtgggactggcccgtggccgagccctgccccaagtgcggctcgggcatcctg
gtcaaaaagcgcacccaggcccggggcgaacacctggcctgccctgaaaaatcctgccgc
tacgtgcggtccctggacggcggggagaccgaagagcaatag
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