Desulfolutivibrio sulfodismutans: GD606_13450
Help
Entry
GD606_13450 CDS
T06784
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
dsd
Desulfolutivibrio sulfodismutans
Brite
KEGG Orthology (KO) [BR:
dsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsd03009
]
GD606_13450 (rlmD)
Enzymes [BR:
dsd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
GD606_13450 (rlmD)
Ribosome biogenesis [BR:
dsd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GD606_13450 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Cons_hypoth95
Methyltransf_25
MTS
Methyltransf_15
Methyltransf_11
Methyltransf_12
FtsJ
TehB
PrmA
Methyltransf_24
Ubie_methyltran
N6_N4_Mtase
mRNA_G-N7_MeTrfase
UPF0020
L51_S25_CI-B8
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
QLA13201
LinkDB
All DBs
Position
2988708..2990078
Genome browser
AA seq
456 aa
AA seq
DB search
MHMEKGSIIDIEVSKLAFGGMGLARVDGFVVFCDRALPGQTVRAEVAKVKKGFAEARLVE
VLTPSPKQVEPFCQHFGQCGGCSWQDLDYAEQLYWKREQVIESLRHLAGIAEATVAAAVP
SPVTRHYRNKMEFAFAGALHLGLYERNAPGRVCDVTGCGLLSKKGAAMLNAVRDYCRTFG
QPAYDHKTGKGLWRHLIIREAQATGQTMVQLITSPRGDAAKAAQGLSDHLAAAFPDLTTF
VHSTRQARVALAVGERIESATGQGFIEERLGKTVFRISPDSFFQTNSLGAQKLYDTAMAA
AGLTGTQTVWDLYCGSGGIALYAAARAKQVIGVDSSAMSIRDAKASAGENGLVNCEFVKG
DVRQSLESLRVKKPDVVFLDPPRSGTHPEVLAALRLLRPGRVIYVSCNPSTLARDAAALV
GDYRVDVVTPVDMFPHGPHVECVLGLVRADAASARK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcacatggaaaaaggaagcatcatcgatatcgaggtgtccaagctggccttcggcggc
atggggctggcccgggtggacggattcgtggttttttgcgaccgggcgttgcctggccag
acggtgcgggccgaggtggccaaggtcaagaaaggatttgccgaggcgcggctggtggag
gtgctgaccccctcccccaagcaggtcgagccgttttgccaacatttcggccaatgcggc
ggctgttcgtggcaggatctggactatgccgagcagctttactggaagcgcgaacaggtg
atcgagagcctgcgccacctggccgggatcgccgaggcgaccgtggccgcggccgtgcca
tcgcctgtgacccgccactatcgcaacaagatggaattcgcctttgccggggccctgcac
cttgggctctatgagcgaaacgccccgggacgggtgtgcgatgtgaccgggtgcgggctt
ttatccaaaaaaggcgcggccatgctcaatgccgtccgggactactgccggaccttcggc
cagcccgcctacgaccacaaaaccggcaagggcctgtggcggcacctgatcatccgcgag
gcccaggccacgggccagaccatggtccagctcatcacctcgccccggggcgatgcggcc
aaggccgcgcaaggcctttcggatcatctggcggcagccttcccggacctgaccaccttc
gtgcattccacccggcaggccagggtcgccctggccgtgggggagcgcatcgaatcggcc
acgggccaggggtttatcgaggagcggttggggaagaccgtgtttcgcatctccccggac
tcctttttccagaccaactccctgggcgcccaaaagctgtacgacacggccatggccgcc
gccggtctcaccggaacccagaccgtgtgggatctgtattgcggttcggggggcatcgcc
ctgtatgcggcggcccgggccaaacaggtcatcggcgtggactcctcggccatgagcatc
cgcgacgccaaggcctcggccggggaaaacgggctggtcaactgtgaattcgtcaagggc
gacgtgcgtcaaagcctggagtcgctgcgggtcaaaaagcccgacgtggtttttctggac
ccgcccaggtccggaacccatcccgaggtgctggccgccctgcggctgctgcgcccgggg
cgcgtgatctacgtctcctgcaatccctccaccctggcccgggacgccgccgcgcttgtc
ggcgactaccgggtggatgtggtcaccccggtggacatgttcccccacggcccgcacgtc
gaatgcgtgctgggactggtgcgcgcggacgcggcgtcggcccggaaataa
DBGET
integrated database retrieval system
