KEGG   Desulfolutivibrio sulfodismutans: GD606_15735
Entry
GD606_15735       CDS       T06784                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
dsd  Desulfolutivibrio sulfodismutans
Pathway
dsd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dsd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GD606_15735 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsd03019]
    GD606_15735 (rny)
Messenger RNA biogenesis [BR:dsd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GD606_15735 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2
Other DBs
NCBI-ProteinID: QLA13610
LinkDB
Position
3477026..3478585
AA seq 519 aa
MDFFTVFIILASLCAGGAGGYYLYQFISQKTLKESRSLAERILEEAKKEAQAHKKEFLVQ
AQDDLFRQKKELEAEYKDRAQTLEAKEAQLSRKQEKLEEKQEQIVERESEMLGAEKRLAG
LERTLTEKQEILDRASEEHLQRLQEVSGLTVEEAKKLVMAETESRTRHEAAKMIRQIEME
ARETADKSGKKILALAIQRYAGDFVAEQTVTAVTLPSEEMKGRIIGREGRNIRALEAATG
VDLIIDDTPETVILSAFSPIRRQVAKMALERLITDGRIHPARIEDIVKKVEQEFEVKLRE
IGEQATFDIGVHGINPELVRLLGHLQYRTSYSQNVLQHSLEVSTLCGIMASELGLDVKKA
KRAGLLHDIGKAVDHEIEGPHAVIGADLAKKFGEGGDIIHAIQAHHEDVPPKSILAILVQ
AADSLSGARPGARKELLESYVKRLEELENLATEFEGVTKAYAIQAGREIRVVVDSDAIDD
DKTFLLCKDIAKQIEDNLTYPGQIRVTVIRERRAVGYAK
NT seq 1560 nt   +upstreamnt  +downstreamnt
atggatttttttaccgttttcatcatcctcgcgtccctgtgcgccggaggcgctggcgga
tattacctctaccagttcatctcccagaagaccctcaaggaatcccgctccctggccgag
cgcatcctggaagaggccaaaaaagaggcccaggcccataaaaaggaatttttggtccag
gcccaggacgacctgttccgccagaaaaaggaactggaggccgagtacaaggaccgggcc
cagacccttgaagccaaagaggcccagctctcccgcaagcaggagaagctcgaagagaag
caggaacagatcgtggagcgggaaagcgagatgttgggcgcggaaaaacgcctggccggc
ctggaacgcaccctcaccgagaagcaggagatcctggaccgcgcctccgaggaacatctg
caacgcctccaggaggtctccggactcaccgtggaggaggccaagaagctggtcatggcc
gagaccgaaagccgcacccggcacgaggcggccaagatgatccgccagatcgagatggag
gcccgggagacggcggataaaagcggcaagaagattctggccctggccatccagcggtat
gccggcgatttcgtggccgagcagaccgtcaccgccgtgaccctgccctcggaagagatg
aaggggcgcatcatcggccgtgagggacgcaacatccgggccctggaagcggccacgggc
gtggacctgatcatcgacgacaccccggaaaccgtcatcctctccgccttttcccccatc
cgccgccaggtggccaagatggccctggagcgcctgatcaccgacggccgcatccatccg
gcccgcatcgaggacatcgtcaagaaggtcgaacaggaattcgaggtcaagctgcgcgag
atcggcgaacaggccaccttcgacatcggcgtccacggcatcaaccccgaactggtgcgc
cttctggggcacctgcaataccgcaccagctattcccagaacgtcctgcagcactccctt
gaggtgtccaccctgtgcggcatcatggcctcggaactgggcctggatgtgaaaaaggcc
aagcgggcgggactgctgcacgacatcggcaaggccgtggaccacgagatcgaaggcccc
cacgcggtcatcggggcggatctggccaaaaaattcggcgagggcggggacatcatccac
gccatccaggcccaccacgaggacgtaccgcccaaatccatcctggccatcctggtccag
gccgcggacagcctctccggggcccggcccggggcccgcaaggagcttctggagagctac
gtcaagcgtctggaggagctggaaaatctggccacggaattcgagggcgtgaccaaggcc
tacgccatccaggccgggcgcgagattcgcgtggtcgtcgattccgacgccattgacgac
gacaagacgtttcttttgtgcaaggacatcgccaagcagatcgaggacaacctcacctat
ccgggacagatccgggtcacggtcatccgcgaacgccgggccgtgggctacgcaaaatag

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