Desulfolutivibrio sulfodismutans: GD606_15735
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Entry
GD606_15735 CDS
T06784
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
dsd
Desulfolutivibrio sulfodismutans
Pathway
dsd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GD606_15735 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsd03019
]
GD606_15735 (rny)
Messenger RNA biogenesis [BR:
dsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GD606_15735 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
QLA13610
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Position
3477026..3478585
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AA seq
519 aa
AA seq
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MDFFTVFIILASLCAGGAGGYYLYQFISQKTLKESRSLAERILEEAKKEAQAHKKEFLVQ
AQDDLFRQKKELEAEYKDRAQTLEAKEAQLSRKQEKLEEKQEQIVERESEMLGAEKRLAG
LERTLTEKQEILDRASEEHLQRLQEVSGLTVEEAKKLVMAETESRTRHEAAKMIRQIEME
ARETADKSGKKILALAIQRYAGDFVAEQTVTAVTLPSEEMKGRIIGREGRNIRALEAATG
VDLIIDDTPETVILSAFSPIRRQVAKMALERLITDGRIHPARIEDIVKKVEQEFEVKLRE
IGEQATFDIGVHGINPELVRLLGHLQYRTSYSQNVLQHSLEVSTLCGIMASELGLDVKKA
KRAGLLHDIGKAVDHEIEGPHAVIGADLAKKFGEGGDIIHAIQAHHEDVPPKSILAILVQ
AADSLSGARPGARKELLESYVKRLEELENLATEFEGVTKAYAIQAGREIRVVVDSDAIDD
DKTFLLCKDIAKQIEDNLTYPGQIRVTVIRERRAVGYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggatttttttaccgttttcatcatcctcgcgtccctgtgcgccggaggcgctggcgga
tattacctctaccagttcatctcccagaagaccctcaaggaatcccgctccctggccgag
cgcatcctggaagaggccaaaaaagaggcccaggcccataaaaaggaatttttggtccag
gcccaggacgacctgttccgccagaaaaaggaactggaggccgagtacaaggaccgggcc
cagacccttgaagccaaagaggcccagctctcccgcaagcaggagaagctcgaagagaag
caggaacagatcgtggagcgggaaagcgagatgttgggcgcggaaaaacgcctggccggc
ctggaacgcaccctcaccgagaagcaggagatcctggaccgcgcctccgaggaacatctg
caacgcctccaggaggtctccggactcaccgtggaggaggccaagaagctggtcatggcc
gagaccgaaagccgcacccggcacgaggcggccaagatgatccgccagatcgagatggag
gcccgggagacggcggataaaagcggcaagaagattctggccctggccatccagcggtat
gccggcgatttcgtggccgagcagaccgtcaccgccgtgaccctgccctcggaagagatg
aaggggcgcatcatcggccgtgagggacgcaacatccgggccctggaagcggccacgggc
gtggacctgatcatcgacgacaccccggaaaccgtcatcctctccgccttttcccccatc
cgccgccaggtggccaagatggccctggagcgcctgatcaccgacggccgcatccatccg
gcccgcatcgaggacatcgtcaagaaggtcgaacaggaattcgaggtcaagctgcgcgag
atcggcgaacaggccaccttcgacatcggcgtccacggcatcaaccccgaactggtgcgc
cttctggggcacctgcaataccgcaccagctattcccagaacgtcctgcagcactccctt
gaggtgtccaccctgtgcggcatcatggcctcggaactgggcctggatgtgaaaaaggcc
aagcgggcgggactgctgcacgacatcggcaaggccgtggaccacgagatcgaaggcccc
cacgcggtcatcggggcggatctggccaaaaaattcggcgagggcggggacatcatccac
gccatccaggcccaccacgaggacgtaccgcccaaatccatcctggccatcctggtccag
gccgcggacagcctctccggggcccggcccggggcccgcaaggagcttctggagagctac
gtcaagcgtctggaggagctggaaaatctggccacggaattcgagggcgtgaccaaggcc
tacgccatccaggccgggcgcgagattcgcgtggtcgtcgattccgacgccattgacgac
gacaagacgtttcttttgtgcaaggacatcgccaagcagatcgaggacaacctcacctat
ccgggacagatccgggtcacggtcatccgcgaacgccgggccgtgggctacgcaaaatag
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