Desulfolutivibrio sulfodismutans: GD606_16380
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Entry
GD606_16380 CDS
T06784
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dsd
Desulfolutivibrio sulfodismutans
Brite
KEGG Orthology (KO) [BR:
dsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsd03019
]
GD606_16380
Messenger RNA biogenesis [BR:
dsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GD606_16380
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
QLA13721
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Position
complement(3614579..3615610)
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AA seq
343 aa
AA seq
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MSGKNTFVKDLVPGRPVDDLFVVADARSGQAKNGPFWTLTLEDATGAVEARIWSPASQTY
QDIRPGALVRVEGMAGSYRDKTQISVDRLEFLPDEELAPLLPLFTASSAVPPEELLAELE
ALCRDAIRHAPWRRFCRKVLTDPEVRRRLLAAPGAKSVHHAYVGGLLEHTLSVCGLVTAI
GGRYPALDMDTLLPAAAFHDLGKAWELSSGFPRDYTDPGRLLGHIVLGLEILEPFFRKAK
DLDPELILHFKHIMVSHHGEYAFGSPKRPKTPEAFVLHFADNIDAKLNQTLGIFADDEPE
AAWSPYVRTLERYLYNPRRAPRQDEAKKPEDKGTTQCLLPLKA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggaaaaaacaccttcgtcaaggatctcgtcccgggccgccccgtggacgatctg
ttcgtcgtcgccgacgccagatccggccaggccaaaaacgggccgttttggaccctgacc
ctggaagacgccaccggggccgtggaggcccgcatctggagtccagccagccagacgtat
caggacatccgccccggcgccctggtgcgggtggagggcatggccggaagctaccgggac
aagacccagatatccgtggaccgtctggaatttctgcccgacgaggaactggcccccctg
ctgccgctttttacggcctcaagcgccgtgcctccggaggagctgctggcggaactggag
gccctgtgccgggacgccatccgccacgccccctggcggcggttctgccgcaaggtgctc
accgaccccgaggtgcgtcgtcggctcctggccgcgcccggggccaaaagcgtacaccac
gcctacgtgggcggccttttggagcacaccctgtccgtgtgcggactggtaacggccatc
ggcggccgctacccggccctggacatggacacgcttttgcccgccgccgcgttccacgac
ctgggcaaggcctgggagctgtcctcggggtttccccgggactacaccgaccccggacgg
cttctggggcacatcgtgttgggcctggagatcctggagccctttttccgcaaggccaaa
gatctggaccccgaactcatcctgcacttcaagcacatcatggtcagccaccacggggaa
tacgccttcggctcccccaaaaggcccaagacccccgaggccttcgtgttgcacttcgcc
gacaacatcgacgccaagctcaatcagaccctggggatctttgccgacgacgagcccgag
gccgcctggtcgccttacgtgcgcaccctggaacgctacctctacaatccccgccgggcc
ccgcgccaggatgaggcgaaaaaacccgaagacaaagggaccacccagtgtttgttacct
ttgaaggcatag
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