Desulfolutivibrio sulfodismutans: GD606_17710
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Entry
GD606_17710 CDS
T06784
Name
(GenBank) hypothetical protein
Organism
dsd
Desulfolutivibrio sulfodismutans
Brite
Ubiquitin system [BR:
dsd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
GD606_17710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
SGL
TEN_NHL
SBBP
DUF5128
Big_13
Mala_s_1-like
BNR
Motif
Other DBs
NCBI-ProteinID:
QLA13968
LinkDB
All DBs
Position
3925638..3930179
Genome browser
AA seq
1513 aa
AA seq
DB search
MNCNISLILRKKCRFIERDGERRQAIVLGCDASDLCCKEIACIEALCSIIFSQYILPFRI
AAGFRQPLRSCREGGVPRAAVCAALVTFSKEPAMRHGVAVSRLFVVLLGLMLPVAALAAD
TFQFSRFAPPDSAQFTYASFNNPHSVAADASGNVYVADTNNHRIQKFSSSGALQVQWGSH
GSADGQFQSPFGITVDASGNIYVADRDNHRIQKFSSSGAFITKWGSEGSADGQFSSPRGV
AVDASGNVYVADFTNHRIQKFSSDGVFQTKWGSQGSADGQLNLPQDITVDASSNVYVAEG
NNHRIQKFSSDGAFITKWGSQGSADGQFRYPDGITVDASGNVYVADTSNHRTQKFSSDGV
FQAKWGSEGSADGQFSYPNGITVDASGNVYVADSQNHRIQKFSSDGAFITNWGSQGSADG
QFQYPYGNAVDASGNVYVADTRNFRIQKYSSDGTFLNKWGSYGSADGQFKDPYGIAVDAS
GNVYVADTYNHRIQIFSSSGAFIATWGSYGSADGQYAYPRGITVDTSGNVYVADTSNNRI
QKFSSDGVFQSKWGVGGTADGQFIQPFGIAVDASGNVYVADRDNNRIQKFSSSGVFQAKW
GSFGSTDGQFFYPFGITVDASGNVYVADTSNHRIQKFSSSGVFQAKWGSNGSANGQFSSP
VGIAFDASGNVYVAESANNRIQKGTPAALAATLESPPPAATNQTSYSLSVDDTVVTQYRY
RLNGGAWSAITPVATPLALTLAEGSHTLELVGGDTWGNWQATDSPTTYTWTIDTTAPGDG
EGQITGQPGESTNATGTDITIGGAGITQYRYSLDGGQTWSGPYGVGTHLTLAGLGEGQHV
LWIQVQDAAGNWQTTYTPIVWTVDTTPPVIHVTAAPPTPTNQTALTVNLVSGEDSTHYRY
DLDGSGYGSSTPVGTAINLSNLTDGSHTLSIIGQDAAGNWQATASATTLAFVVDTQSPLA
TVGQTPDDPTSATAIDIIVGGEGVVAYRYRLDSGEYGAETPVATHVVESGLSDGTHHVFV
IGRDTAGNWQSESGPTTVSWTVDTLSPIATVTGVPSSPTNNDAATLTVAGDGVTHYKYSL
DSGETYSAQTPVATPIVLENLPDGGHSVWVLGRDEAGNWQPESISTKVSWVVDTDSPQVM
LGNVPSDPTNQTSAVVSISGEGVVAYQYLFDSGGYGAFLTVAEHPSISLEFATQGAHSLS
VKGRDAAGNVQETPTTATWTVDLQSPVAVLTGAPEGTVATRDVSVTVGGEGVTQYKFRFD
AEAWSAEAVPVATPITRTGLAEGSHTLEVVGRDAAGNWQAESSAATASWTIDVTAPTAEL
TGVPVGEVNTTAAVVTVGGQGVTQYRYRLDAGAWSAARPVAQQILLSDLAEGAHTLYVVV
ADALGNWQSTDAATSASWTVDLTAPGDPVIPPGQNPGTQTTRRPTLRWTAVAGATQYLIE
VSDSADFSSPLVHRTVSGTSYTLADIEALARTGIWYWRVRALDAAGNQGAWVTGSFEYKA
AAAGGMILLLFQE
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgaattgtaacatttctttaatactccgcaaaaagtgtcgctttatcgagcgtgatggc
gagagaaggcaagcaattgttcttggatgcgatgcaagtgatttgtgctgcaaagaaatt
gcttgcatcgaggcgctgtgttcgataattttttctcagtatatattgccgttcagaatc
gccgcaggctttcgacaaccccttcgttcctgccgggaggggggtgtcccccgggccgcc
gtttgtgccgccctggtcacattctccaaggagcccgccatgcgtcacggtgtcgccgtc
tcgcgcctttttgtcgttctgcttgggcttatgctgccggtggcggcgttggccgccgac
accttccagttcagccgtttcgccccgccggattcggcgcagttcacgtatgcgagtttc
aataatccccatagcgtcgccgccgacgcctccggcaacgtctatgtggcggataccaat
aaccaccgcatccagaaattctcctcaagcggcgcactccaagtccaatgggggagccac
gggtcagcagacggtcagttccagtctccatttggcatcaccgtcgacgcctccggcaac
atctatgtggcggatagagacaaccaccgcatccaaaaattctcatcaagcggcgcgttc
attaccaaatgggggagcgaagggtcagcagacgggcagttctcttctccacgaggggtt
gctgttgacgcctcaggaaacgtctatgtcgctgatttcaccaaccaccgcatccaaaaa
ttctcctccgacggcgtgttccaaaccaaatgggggagccaagggtcagcagatgggcag
ttgaacctcccacaagacatcaccgtcgatgcctccagcaacgtctatgtggcggaaggg
aataatcaccgcatccagaaattctcctcagacggggcgttcatcaccaaatgggggagc
caagggtcagcagacgggcagttcaggtatccagatggcatcaccgtcgacgcctccggg
aacgtctatgtggcggatacctctaaccaccgcacccaaaaattctcctcagacggcgtt
ttccaggccaaatgggggagcgaagggtcagcagacggacaattttcctatccaaatggc
atcactgtcgacgcctccgggaacgtctatgtggcggacagccagaatcaccgcatccag
aaattctcctcagacggggcgttcatcaccaactgggggagccaagggtcagcagacggg
cagttccagtatccgtatggcaatgccgtcgatgcctccgggaacgtctatgtggcggat
acccgtaacttccgcatccagaaatattcttccgacggcacgttcttgaataaatggggg
agctacggatcagcagacgggcagttcaaagatccatatggcatcgccgtggacgcctcc
ggaaacgtttatgtcgcggatacctataaccatcgcattcagatattttcttcaagcggc
gcgtttattgccacatgggggagctacgggtcagcagacgggcagtacgcctatccacgt
ggcatcaccgtcgatacctccgggaacgtctatgtggcggatacctctaacaaccgcatc
cagaaattctcctcagacggcgtattccaatccaaatggggggtcggcgggacagcagac
ggacagttcatccagccatttggcatcgccgtcgacgcctccggaaacgtctatgtggcg
gatagagacaacaaccgcatccagaaattctcctcaagcggcgtgttccaagccaaatgg
ggaagcttcggatcaacagacgggcagttcttctatccatttggcatcaccgtcgacgcc
tccggaaacgtctatgtggcggacaccagtaaccatcgtatccagaaattttcctcaagc
ggcgtgttccaagccaaatgggggagcaacgggtcagcaaacgggcagttcagctctcca
gtcggcatcgccttcgacgcctccggcaacgtctatgtggcggaaagcgcgaacaaccgc
atccagaaagggactccagcggccttggcggcaacgctcgaatccccgccgcctgccgcg
acgaaccagaccagctattccctgagcgtggacgacacggtcgtcacccaataccgctac
cgcctcaacggcggggcctggagcgccatcacccccgtggccacgcccctcgcgctgacc
ctggccgaggggagccacaccctggagcttgtgggaggcgacacgtggggcaactggcag
gcaacggactcccccaccacctacacctggaccatcgacaccacggccccaggcgatggc
gagggccagatcaccggccagcccggggagagcaccaacgccaccggcacggacatcacc
atcggcggcgcggggattacacagtatcgctattccctggacggcggccagacctggagc
ggcccctacggtgtgggcacgcacctgacgcttgcgggccttggcgagggacagcacgtc
ctgtggatccaggtccaggacgcggccgggaactggcagaccacctacacccccatcgtc
tggacggtggacaccacgccgccggtcatccacgtgaccgccgccccgccgaccccaacc
aaccagaccgccctgaccgtcaacctcgtatccggcgaggactcgacccattaccgctac
gatctggacggatcaggctacggctcgtccactccggtaggcacagccatcaacctgtca
aacctcaccgacggaagccacacgctttccatcatcggccaggacgcggccgggaactgg
caggccaccgcctcggccacgaccctggccttcgtggtggacacccagtcccccctggcc
acggtgggccagactccggatgatccgacctcggccacggccatcgatatcatcgtcggc
ggcgagggcgtggtcgcctaccggtatcgtctggacagcggcgaatatggcgcggaaacc
cctgtggccacccatgtggttgagagcggcctctcggacgggacccaccacgtgttcgtc
atcggccgcgacaccgccgggaactggcagtccgagtccggcccgaccaccgtttcctgg
accgtggacaccctttcgcccatcgccacggtcaccggcgtgccgtcttctcccacgaac
aacgacgccgcgaccctgaccgtggccggggacggcgtgacccactataagtacagcctt
gacagcggcgagacctattcggcccagacccccgtggccacgcccatcgtcctcgaaaac
ctgcccgacggtggccattcggtctgggtcttgggccgcgacgaggccggcaactggcag
cccgagtccatatcgaccaaggtctcctgggtggtggacaccgattcgccgcaggtcatg
ctgggcaacgtgccctccgatccgaccaaccagacctcggccgtcgtcagcataagcggc
gagggcgtggtcgcctaccagtacctgttcgactccgggggctacggggcgttcctgacc
gtggccgaacatccgtccatcagcctggaatttgccacgcagggcgcgcattcgctctcg
gtcaaggggcgcgatgcagcgggcaacgtgcaggagacgccgaccaccgccacctggacc
gtggacctgcaatcgcccgtggccgtgctgaccggcgcgccggaaggcacggtggccacg
cgggacgtgtcggtcacggtgggcggtgagggcgtgacacagtacaagttccgcttcgac
gccgaggcctggagcgccgaggcggttcccgtggccacgccgatcacccggacgggcctt
gcggaaggcagccataccctggaggtcgtgggcagggatgcggccgggaactggcaggcc
gaatcctcggccgccaccgcctcctggaccatcgacgtcacggcccccacggcggaactg
accggggtccccgtgggcgaggtcaacaccaccgccgccgtcgtcaccgtgggcggccag
ggcgtgacgcagtaccgctacaggctggatgccggggcatggagcgcggcgcggcccgtg
gcgcagcagatcctcctgagcgatctggccgagggcgcgcacaccctgtacgtggtcgtg
gccgacgccttgggcaactggcagtccacggatgcggcgaccagcgccagttggaccgtg
gacctgaccgccccgggcgatccggtcatcccgcccgggcaaaaccctggcacgcagacc
acccgccggccgaccctgcgctggacggccgtagccggggccacgcaatacctgatcgag
gtcagcgactccgccgacttctcgtcgccgctggtgcaccggaccgtgtccggaacctcc
tataccctggccgacatcgaggccctggcgcgcacaggcatctggtactggcgggtgcgc
gccctggacgcggccgggaaccagggggcatgggttacgggctcgttcgaatacaaggct
gcggcggccggggggatgatcctgctgttgtttcaggaataa
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