Drosophila sechellia: 116800180
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Entry
116800180 CDS
T01064
Name
(RefSeq) protein suppressor of forked isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
dse
Drosophila sechellia
Pathway
dse03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116800180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dse03019
]
116800180
Messenger RNA biogenesis [BR:
dse03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
116800180
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
Motif
Other DBs
NCBI-GeneID:
116800180
NCBI-ProteinID:
XP_032580889
LinkDB
All DBs
Position
X:complement(21994041..21997878)
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AA seq
733 aa
AA seq
DB search
MSSARDLIKVDIEWGMERLVRAQQVVELRPYDIESWSVMIREAQTRPIHEVRSLYESLVN
VFPTTARYWKLYIEMEMRCRYYERVEKLFQRCLVKILNIDLWKLYLTYVKETKSGLSTHK
EKMAQAYDFALEKIGMDLHSFSIWQDYIYFLRGVEAVGNYAENQKITAVRRVYQKAVVTP
IVGIEQLWKDYIAFEQNINPIISEKMSLERSKDYMNARRVAKELEYHTKGLNRNLPAVPP
TLTKEEVKQVELWKRFITYEKSNPLRTEDTALVTRRVMFATEQCLLVLTHHPAVWHQASQ
FLDTSARVLTEKGDVQAAKIFADECANILERSINGVLNRNALLYFAYADFEEGRLKYEKV
HSMYNKLLQLPDIDPTLVYVQYMKFARRAEGIKSARSIFKKAREDVRSRYHIFVAAALME
YYCSKDKEIAFRIFELGLKRFGGSPEYVMCYIDYLSHLNEDNNTRVLFERVLSSGGLSPH
KSVEVWNRFLEFESNIGDLSSIVKVERRRSAVFENLKEYEGKETAQLVDRYKFLDLYPCT
STELKSIGYAENVGIILNKVGGGAQSQNTGEVETDSEATPPLPRPDFSQMIPFKPRPCAH
PGAHPLAGGVFPQPPALAALCATLPPPNSFRGPFVSVELLFDIFMRLNLPDSAPQPNGDN
ELSPKIFDLAKSVHWIVDTSTYTGVQHSVTAIPPRRRRLLPGGDDSDDELQTAVPPSHDI
YRLRQLKRFAKSN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggccagagaccttatcaaagtcgacatagaatggggcatggagcgcctggtg
cgagctcagcaagtggtggagctgcggccctatgacatcgagtcctggagtgtcatgatc
cgcgaggcccaaacgcggccaatccacgaagtacgcagcctttacgagtcgctagttaat
gtgttcccgacaaccgctcggtactggaagctatacattgagatggagatgcgctgccgg
tactacgaacgcgtagagaaacttttccaacgctgcctagtcaagattttaaacatcgac
ctatggaagctctatcttacctacgtgaaggaaaccaagtcgggtctaagcactcacaaa
gaaaaaatggcccaggcttatgattttgcactggagaaaatcggcatggatctacactcg
ttcagcatctggcaggattacatatactttctgcggggcgttgaagcagtgggcaactat
gctgagaaccagaagatcacagcagtgcgccgcgtatatcaaaaggcggtagtcacacct
atcgtgggcatcgagcagttgtggaaggactatatcgcattcgagcaaaacataaaccct
attatatcagagaagatgagtctggagcgatctaaggattacatgaacgcccgtcgtgtt
gccaaagagttggaataccacacaaagggtctcaatcgcaacctgccagccgtcccgccc
acactcacaaaggaggaggtgaagcaagtggagctgtggaagcgctttatcacgtatgag
aagtctaatccgttgcgcactgaagatacggccctagtcacccgtcgcgtcatgttcgcc
acagagcaatgtttgctggtgctcacccaccacccggcagtgtggcaccaggcttcccaa
ttcctggacaccagtgctcgcgtgctcaccgagaaaggcgacgtccaggcggccaagatt
tttgcggacgagtgcgctaatatactggagcggtctataaacggcgtgctaaaccgaaat
gcgttgctatattttgcctatgcggactttgaagaaggacggctaaagtacgagaaggtg
cactccatgtacaacaagctgttacagttgccagacattgatcccacattggtctatgtt
cagtacatgaagttcgcccgtcgtgctgaggggatcaagtcggcccgtagcatttttaag
aaagctcgagaggacgtaaggtcgcgctatcacattttcgtggccgctgctttgatggag
tactattgctccaaggacaaagaaattgcgttccgcatcttcgagctgggattgaagcgt
tttggtggcagtccagagtatgtgatgtgctacattgactacctgtcccatctaaacgag
gacaataatacgcgcgtcctgtttgaacgggtacttagttcaggtggtttgtcgccgcac
aagagtgttgaggtctggaatcgcttcctcgagttcgagtctaatattggggatctctcc
agcatcgttaaggtcgaacgtcgccgtagtgccgttttcgagaaccttaaagagtatgag
ggcaaggagaccgcccagctggttgaccgctacaaatttctggacctttacccctgcacc
agcaccgagctcaagtcaataggatatgctgagaatgtgggcattatactgaacaaggtg
ggtggtggagctcaaagccagaacaccggagaggtcgagacagatagcgaggcaacgcca
ccgttgccacgtccagatttctcccagatgattccatttaagccgcgtccatgtgctcat
cctggtgcccatccacttgcaggtggtgtatttccgcaaccgccagctctggccgctttg
tgcgccaccctgcctccaccgaactccttccgtggaccgttcgttagcgtagagctactg
ttcgatatcttcatgcgtctcaatcttccggactccgcaccgcaaccgaatggagacaac
gaattgtcgcctaagatcttcgatctggctaagtcggttcactggatcgtggacacaagc
acgtatacgggggtgcagcacagtgttacggccattccaccgcgccggcgacgactgctg
cctgggggcgatgatagtgacgacgagctgcagaccgctgtgccgccctcccacgatata
tatcgcctgcggcagctaaagcgtttcgccaagtctaattaa
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