Drosophila sechellia: 116800892
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Entry
116800892 CDS
T01064
Name
(RefSeq) DEAD-box helicase Dbp80 isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
dse
Drosophila sechellia
Pathway
dse03013
Nucleocytoplasmic transport
dse03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116800892
03015 mRNA surveillance pathway
116800892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dse03019
]
116800892
Enzymes [BR:
dse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116800892
Messenger RNA biogenesis [BR:
dse03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116800892
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
116800892
NCBI-ProteinID:
XP_032573152
LinkDB
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Position
3L
Genome browser
AA seq
460 aa
AA seq
DB search
MGDWAKKAEDQEVSKLVDKLNLDSKSGEETDFDVADPAETSLLIKILGKGLVNTKLSLDI
QQKNPNSPLHSVKTFEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQ
SGTGKTAAFVLAMLSRVNVGLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVR
GEEVDRSKKIEEHILIGTPGKLLDWGIKFRLFDMKKITVFVLDEADVMIATQGHHDQCIR
IHKMLNPHCQMLFFSATYGKEVMDFARLIVADPTIIRLMREEESLENIKQYYVKCKNEEG
KYNAIQNIYGCISVGQAIIFCHTRRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRF
RSGLEKVLITTNILSRGIDIEQVTIVVNFDLPVDVDGKADCETYLHRIGRTGRFGKSGIA
INLITDEKTMKVCSDIEKHFNKKIEVLNTDSADDIEKIGT
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattgggctaaaaaagctgaggaccaggaggtttctaagctggtcgacaaactt
aacttagactctaaatctggcgaagaaaccgatttcgatgtcgccgatccagctgaaaca
agtctcctcataaaaatactaggaaaggggctggtgaacacaaagttatctctcgacatt
caacaaaaaaatccgaattcacccttacattccgtaaaaacatttgaagctttacaccta
aaagcatctttgttaaaaggaatttacgcaatggggtttaatactccatcaaaaattcaa
gaaacagcgttgccaactcttcttgcagatccaccacaaaatatgatagctcaaagccag
tctgggacaggcaaaacagcggcatttgtattggccatgcttagccgagtcaacgttggt
ttaaatcatcctcaggttctgtgtttatcccctacgtacgagttggcaattcaaactgga
gaagtggctgcgcgaatgggacaattttgccgggaaataaagctaagatttgcggtccgt
ggagaagaggttgaccgcagtaaaaaaattgaagaacacattttgattggtaccccagga
aaacttttggattggggaataaaatttcgtttatttgatatgaagaaaataaccgttttt
gtattggatgaagcagatgtaatgatagccacccaaggtcatcatgatcaatgcattcga
atacacaaaatgctgaatccacattgtcaaatgttgtttttctctgctacttatggtaaa
gaggttatggactttgctcggctgatcgttgcagatcccacaataataagattaatgcgt
gaagaggaatcacttgaaaacataaagcaatattatgttaagtgtaaaaatgaagaagga
aaatataatgcgattcaaaatatttacggttgcattagcgttggccaagctataatattt
tgccatacacgaagaactgctgcttggcttgcagcaaaaatgacgtcggatggtcattct
gttgctgttcttaccggggatttaacagtagtgcaaagacttgatgtcttagatcgtttc
cgttcaggacttgaaaaggtgcttatcactacaaatattttatcaagaggcattgatatt
gaacaagttacaattgtagtcaatttcgatttgcccgtagacgttgatggaaaggctgac
tgtgaaacttatttacatcggataggacggactggaaggtttggaaagtctggaatcgcc
ataaatcttataacagatgagaagaccatgaaagtgtgttccgatatcgaaaaacatttc
aacaaaaaaattgaagttttaaataccgatagtgccgatgatatagaaaaaattggtaca
tag
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