KEGG   Drosophila sechellia: 6605414
Entry
6605414           CDS       T01064                                 
Name
(RefSeq) THO complex subunit 6
  KO
K13175  THO complex subunit 6
Organism
dse  Drosophila sechellia
Pathway
dse03013  Nucleocytoplasmic transport
dse03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dse00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    6605414
  09122 Translation
   03013 Nucleocytoplasmic transport
    6605414
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dse03019]
    6605414
   03041 Spliceosome [BR:dse03041]
    6605414
Messenger RNA biogenesis [BR:dse03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     6605414
Spliceosome [BR:dse03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    6605414
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz NBCH_WD40 Beta-prop_IP5PC_F Beta-prop_WDR41 Beta-prop_TEP1_2nd DSE1_N Beta-prop_WDR3_2nd WDR55 Beta-prop_ACSF4 Beta-prop_NOL10_N Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_Vps41 PAC11 Beta-prop_DCAF12 WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C
Other DBs
NCBI-GeneID: 6605414
NCBI-ProteinID: XP_002030247
UniProt: B4HFK2
LinkDB
Position
3L
AA seq 350 aa
MKQKDLKRAYNNVLAQAISDSNQYLFAGNLFGDIFVLRIKELDKGSEEPPGKLKIFPQGS
DVDINYLTFHRDFLIVGAVGLIYGLKWNEEEESLATKRSWEVKIPIQVDAVEVPDVNSMW
LDSENSILFAGCGDGVIYQVSLEDGRIQREYRGHTDYVHSVVGNAKGQIFSGAEDGTVRV
WSTKQQQHTSMLEPYKNPNLLRPDWGKWIGAVAVNEDWLLCGGGPKASIFHLRSLESTCV
FNFPGRVHLCDFVDDCVLIGGEHNHVQSYTLNGVLQANIPVEHTACYSAVWQTSPIKFIS
IAGFSNKLHILKDFRFLDSKIDMYGNVEGEENDLEEEDELIEKPLTVEAA
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgaaacaaaaggatctgaaacgcgcttacaataatgtcctagcacaggctatatccgac
tctaatcagtacctatttgcgggcaatctctttggcgacattttcgtactcagaataaaa
gaactggacaagggttccgaggagccacctggcaaactaaagatattcccgcagggcagc
gatgtggacatcaattacctgaccttccatcgcgatttcctgatagtgggtgcagtgggt
cttatttacggattgaaatggaacgaggaggaggaatccctggccaccaaacggtcctgg
gaggtaaagatacccattcaagtggatgccgtcgaagtgccggatgttaactccatgtgg
ctggactcggaaaacagcatcctgtttgctggttgtggcgacggagtgatctaccaagtg
agcttggaggacggacgcattcagcgcgagtaccgcggacacacagactacgttcacagt
gtggtgggcaatgccaaaggacagatcttctctggcgccgaggatggcactgtgcgagtg
tggagcaccaagcagcagcagcacacttcaatgctggagccttacaagaacccaaatctg
ttgcgtccggattggggcaaatggataggagctgtggctgtcaacgaggattggctgctt
tgcggtggtggacccaaagcatcaattttccacctgcgttccctggaaagcacatgtgtc
tttaacttccccggacgcgtgcatctatgtgactttgtggacgactgtgtgttaatcggt
ggagagcacaatcatgtgcagtcctacactctaaatggagtactgcaagccaatattccc
gtggagcacacagcctgctactctgctgtttggcaaacatcgcccattaaatttatttcc
atcgctggtttcagcaacaagttgcacatccttaaggatttccgcttcctggacagcaag
attgatatgtatggcaatgtagagggcgaggaaaacgacctggaggaggaagacgaactt
attgaaaaacctctgacagttgaggcggcataa

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