Drosophila sechellia: 6605530
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Entry
6605530 CDS
T01064
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
dse
Drosophila sechellia
Pathway
dse03013
Nucleocytoplasmic transport
dse03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6605530
03015 mRNA surveillance pathway
6605530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dse03019
]
6605530
03041 Spliceosome [BR:
dse03041
]
6605530
Messenger RNA biogenesis [BR:
dse03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
6605530
Spliceosome [BR:
dse03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
6605530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
6605530
NCBI-ProteinID:
XP_032574244
LinkDB
All DBs
Position
3L:12725799..12729978
Genome browser
AA seq
954 aa
AA seq
DB search
MMFTGTNQQQDTRFSDKEKKLMKQMKFGDCLNKRVDMSKVKLDVLRPWISKKITDILHIE
DDVVVEFVYNQLEEEKYPCPKKMQINMTGFLNGRNARQFMGELWALLLSAQESDSGIPAE
FIQQKKDEILKREEEQRQRDRSRSRSRSRSQRDSSRRDRQRDRSKSKSRSRSRSVKPANN
NGSVPSAAREAAANAAAKIRKRGSSSAARPGSRERRSSRRPRSRSRSRSRTAGKKTGSVE
PAPAKTVNGRHSTDKTSPVPPASKNKSRSRSHSRSRSPRSRSRSPSAKRSRSRSSSRRSR
RRGRSSSISLSPERNQDQFEHRRNKNSVQNKRQYRNNRGDSASSMERGNDRGRQFGGGGG
GRRGGRRFSPRGRSPMRQDNGGGNGGNRFQRSNSRRRSRSRHLSRSPMRYSRSPRRFNNR
RRSPMMNFRGGGRGGGRGGGHRQMWQHRGGSPNFRGGGRIHWQARQSPGGGGRGGGGGMG
RFDRRQSPQQNRYNRDHRQSPMQQNQPFRKQFSPHQGPGRRFSSPQQRRNSRDRRPNSRE
RRSSPGGGGGHMNRWDNPPPARNRRSSSGSSAGGRQQRQRSASPPEKRRSSHSRSRSLSR
QRSRSRSSSQHSRKRESPVGRSSVEYAGPAVNTIDLCREEQQRKNKPETIIVLDEGPAVR
SSYASLSRTPSPFLKPHERLAAAKAAAAASAAVPKKSRDQSQSSSSDSSAESDDSEEQPR
RKKQPTNVETSKGKKEKVRRSSESSTSTEQSDDEDNSSGDERLKKKLQQKKSKEVAALKG
KEKEHEKEKDKRRSDKKSKRGAISSGDEESTSSRKRGHKKTRRDEAGDNSDSEDEHVPKK
KRKKAKKPADSSDSDSEASSKRKKHKKHKKHSKKSKKHKKHKRKCSAGKSRADSSSQGSS
DEDEQLPPAVAAKRNGNAGKLALLLPGASGPGVINEDLEKQLRERALKSMKKLD
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcacgggcaccaaccagcagcaggacacgcggttcagcgacaaggagaagaag
ctgatgaagcaaatgaagttcggtgattgcctgaacaagagggtggatatgtcgaaagtc
aagctggacgtactgcgtccgtggatcagcaagaagatcaccgacatcctgcacatcgag
gacgacgtggtcgtcgagtttgtctacaatcagctggaggaggagaagtatccgtgcccc
aagaagatgcagatcaatatgacgggcttcttgaacggccgaaatgcccgccagtttatg
ggtgaactttgggccctgctgctctcggcacaggaaagcgattcgggtataccggcggag
tttatacagcagaaaaaggatgagatactcaaacgggaggaggaacagcggcagcgggat
cgatcgagatcccgttcgcgttcccgctcccaacgagacagttctaggcgagatcggcag
cgtgaccgctccaaatccaagtcccgctccagatcccgctcagtgaagccggccaacaac
aacggttcggtgcccagtgccgcacgagaagcggccgccaatgcggctgccaaaatccgt
aaacgcggctcctcctcggccgcgcgtcccggctccagggagcggagatccagccgacga
ccacgttcgcgttcacgttcccgctcgcgaaccgccggcaaaaagacgggctcggtggag
cccgcacccgccaagactgtcaacggccgccattcgacggacaagacctcgccggtaccg
ccggcctccaagaacaagtcgcgctcccgctcgcattcccggtcgcgatcgccgcgcagt
cgatctcgatcgcccagcgccaagcggtcacgttcccgcagttcctcgcgacgcagtcgc
cgacgaggacgctccagcagcatatcgttgtcgccggagcgcaaccaggatcagtttgag
caccggcgcaacaagaacagtgtgcaaaacaagcgacaatatcgcaacaatcgcggggac
tcggctagttcaatggagcgcggtaacgatcgaggcaggcagtttggcggtggcggaggt
ggtcgtcgaggtggcagacgcttctccccgcgaggacgcagtccgatgcgacaggataat
ggcggtggcaacggcggcaatcgctttcagcgatccaattctcgccgcaggtcgagatcc
aggcatctatcacgctcgcccatgcgttattctcgctctccaagacgcttcaacaaccgt
cgccgttcgccgatgatgaactttagaggtggaggacggggtggcggacgtggcggcgga
catcgacagatgtggcagcatcgcggcggttcgcccaacttccgcggtggcgggcgcatc
cactggcaggccagacagagtcctggcggcggcggacgtggaggtggaggcggaatgggt
cgcttcgacaggcgccagtcgccgcaacagaatcgctataatcgcgaccaccgacagtcg
ccaatgcagcagaatcagccgttccgcaagcaattctccccgcatcagggaccgggacgt
cgcttctcgtcgccgcagcaacgacgaaattcaagagatcgtcgccccaactcaagggaa
aggcgcagctcaccgggcggtggtggcggtcacatgaatcggtgggacaacccgccgcct
gcacgaaaccggcgctcatcatcgggaagctctgcaggtggacggcagcagcgacagcgc
agcgctagtccgccggagaaacgccgtagtagccatagtcgcagtcgaagcctgagtcgc
caacgaagccgcagtcgctccagttcgcaacacagtcgcaagcgggagagtccagttggg
cgctcgtcggtggagtatgctggcccggcggtgaacaccatcgatctctgtcgcgaggag
cagcagcgcaaaaacaagccagaaactatcatagtgctggacgagggtccagccgtgcgc
agcagctacgccagtctgtcccgcacgccctcaccgttccttaagccccacgagcgtcta
gccgcagccaaggcagctgctgctgcgtcggcggcggtaccaaagaaatcccgcgatcag
agccagagcagcagttcggacagcagtgccgagagcgatgatagcgaggagcagccgcgt
cgcaagaagcagccaaccaacgtggagacttccaagggcaagaaggagaaggtgcggcgc
agctcggagagctcaaccagcaccgaacagagtgacgacgaggacaactccagtggggat
gagaggctcaagaagaagctgcagcaaaagaagagcaaggaggtggcggctttaaaggga
aaagagaaggagcacgagaaggagaaggacaagcggcgctcggacaagaagtccaagcgg
ggcgcaatctccagcggcgatgaggagtcgacgagcagtcgcaagcgcgggcacaagaag
acgcgtcgggacgaggccggcgacaacagcgattccgaggacgagcatgtgcccaagaag
aagcgcaagaaggcgaagaagccggcggattccagtgacagcgactcagaggcctcctcc
aagcgcaagaagcataagaaacacaagaagcacagcaagaagagcaagaagcataagaag
cacaagcggaagtgcagtgccggcaagtcgcgggcggacagcagttcccagggcagcagc
gacgaggatgagcagttgccgccggcggttgcggccaagcggaatggaaacgctggcaag
ctggcgctactgttgccgggcgcctccggacccggtgtcatcaacgaggacctcgagaag
cagctgcgggaacgggccctcaaatcaatgaaaaagctggactga
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