Drosophila sechellia: 6605646
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Entry
6605646 CDS
T01064
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
dse
Drosophila sechellia
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dse03000
]
6605646
Transcription factors [BR:
dse03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
6605646
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
6605646
NCBI-ProteinID:
XP_002030464
UniProt:
B4HHC5
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All DBs
Position
3L:complement(13768400..13772674)
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AA seq
386 aa
AA seq
DB search
MTSISALLHRSHSHSNGYTSSGSSNHSHSSSLSPQLPGINLGLGMVGGLGMGMSVGVGSG
SGNTSPPPMPPADLAVPPAVPTTVAPKMHQHSQHHGNSHHNAPTGHSNPNTGSHHNSHDH
IKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRAL
HMKEHPDYKYRPRRKPKTLNKSPVPGGGGGSGGGVNGGVNAGGAGNSGPGGPGSGSPKDI
QPQLSPLGQSLPHLHGHPHQSPYQPHPHHPHPHPHHVQLAAATLSAKYGFGSPLELSLPR
LPNAFPGLAHYPLDPTLALDLQARLQAMYAGSIYHPWRYLPLISPETPPSPPSSSGTGIS
SYGCVKSEKSSPNAVVASAASPPNII
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcatctcggccctgctccatcggagccacagccacagcaatggttacacgagc
agcgggagtagcaatcacagccatagcagcagtctctcaccgcagttgcccggcatcaat
ttgggtttgggcatggtcggtggcttgggcatgggtatgagcgtgggagtaggctctgga
tcgggaaacaccagcccaccaccgatgccgccagctgacctcgccgttccgccagcggtc
cccactacggtggcacccaaaatgcaccagcactcacaacaccatggcaactcccaccat
aatgccccaaccggccactcgaatccgaatactggaagccatcacaacagccacgaccac
attaagcgaccaatgaacgctttcatggtctggtcgcgggggcagcgtcgcaaaatggcc
caggacaatccaaaaatgcacaattccgaaatatcaaagcgcctgggcgccgagtggaaa
ttactcaccgaaggacagaagcgtccattcatcgacgaggcaaaacgattgcgggctctg
cacatgaaagaacatcccgactacaagtatcgaccacgtcgcaagcccaagacgctcaac
aagtcaccggtgccaggtggtggtggcggcagtggaggtggtgtcaatggtggtgtcaac
gctggtggtgcgggtaactccggtcccggtggcccaggatcaggctcccccaaggatatt
cagcctcagctgtcgcccttgggtcagtcgctgccacatctccacggacatccgcaccag
tcaccatatcaaccgcatccacaccacccgcatccccatccgcatcatgtccagctggcc
gccgccaccttgagcgccaagtacggttttggttcgccactggagttgtccctgccccgc
ctgccgaatgcctttcccgggctcgcccactatccactggatccaacgttggccctggac
ctacaggctcgcctccaggcgatgtacgccggctccatctaccacccgtggcggtatttg
ccgctgataagtccggaaactccaccctccccgcccagcagcagcggtaccggcatctca
tcctacggatgcgtcaagtcagagaagtcctcgccaaatgcggtagtggccagcgcggcc
agtccgccgaacatcatttga
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