Drosophila sechellia: 6606306
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Entry
6606306 CDS
T01064
Name
(RefSeq) probable histone-binding protein Caf1 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
dse
Drosophila sechellia
Pathway
dse03082
ATP-dependent chromatin remodeling
dse03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
6606306
03083 Polycomb repressive complex
6606306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dse03036
]
6606306
Chromosome and associated proteins [BR:
dse03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
6606306
Histone modification proteins
HAT complexes
HATB complex
6606306
HDAC complexes
Sin3A-HDAC complex
6606306
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
6606306
PRC2.2
6606306
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
6606306
Heterochromatin formation proteins
Other heterochromatin formation proteins
6606306
Chromatin remodeling factors
NuRD complex
6606306
NuRF complex
6606306
NuRF complex (fruit fly)
6606306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
6606306
NCBI-ProteinID:
XP_002031111
UniProt:
B4HE05
LinkDB
All DBs
Position
3R:complement(13393759..13395715)
Genome browser
AA seq
430 aa
AA seq
DB search
MVDRSDNAAESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQ
DGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIE
IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH
QKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWH
LLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK
TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST
EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEI
PASELETNTA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggtggatcgcagcgataatgcagcggaatccttcgacgacgccgtcgaggagcgggtg
atcaatgaggagtataagatttggaaaaagaacacgccgttcctgtacgatctggtcatg
acgcacgccctggaatggccctcgttgaccgcccagtggctgccggacgtgaccaagcag
gatggcaaggactactcggtacatcgtcttatactgggcacacacacatctgacgagcag
aaccatctactcatcgccagcgttcagttgcccagcgaggatgcccagttcgatggatcg
cattacgataacgagaagggcgagtttggaggctttggatcggtgtgcggcaagatcgag
atcgagattaagatcaaccacgagggcgaagtgaacagggcccgctacatgccccagaac
gcctgtgtaatcgccaccaagacgccgtcgagcgatgtcctggtcttcgactacacgaaa
catccaagcaagccggaaccgtctggcgaatgccagcctgatctgcggctgcgcggtcat
caaaaggaaggctacggactctcttggaatcccaaccttaatggctatttgctgtcagcc
tctgatgatcacaccatctgcttgtgggacatcaatgccacacccaaggaacatagggtt
attgatgccaagaacatcttcaccggccacaccgccgttgttgaggacgtggcttggcat
ctgctccatgagtctctgttcggatcggtggctgacgaccagaagctaatgatctgggac
acccgcaacaacaacacctcgaagccctcgcatacggtggacgctcacacagccgaagtc
aattgcttgagctttaatccctactcggagttcatcctggccacgggctccgctgacaag
actgtggctctgtgggatctgcgcaacctaaagctaaaactacattccttcgagtcgcac
aaggacgagatcttccaggtgcagtggtcgccgcataacgagactattctcgcctcctcc
ggcactgaccgccgcctacacgtctgggatctgtccaaaattggcgaggagcagagtacg
gaggatgctgaggacggaccacccgagttgctctttatccatggcggtcacactgccaag
attagcgatttctcgtggaaccccaacgagccatggatcatttgctccgtatccgaggac
aatattatgcaggtctggcaaatggccgagaatgtctacaacgacgaggagccagagatt
cccgcctccgagttagaaaccaataccgcttaa
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