Drosophila sechellia: 6606344
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Entry
6606344 CDS
T01064
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
dse
Drosophila sechellia
Pathway
dse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6606344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dse03019
]
6606344
Messenger RNA biogenesis [BR:
dse03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
6606344
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
6606344
NCBI-ProteinID:
XP_002031149
UniProt:
B4HEH8
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All DBs
Position
3R:13718505..13722234
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AA seq
900 aa
AA seq
DB search
MPRAPKRVHQEAKEESAQADQPTQNSASEDIEAFTNKGFKNAIAATKAANAFPQGTARAL
YLSYPGYARVIEDLTQRVVALIGNVLHSKDIKGDIKKRQMEEQFEMVQECNDLLFERITT
NLDIKAGLRRNTQQVVEAQVDVMTSSTSIEPAVAAPQTQGTPKAGSWNRTTGTPQRNMVS
TRLFTAKNIIRPQTQFREPVDNSAQNPFVPRLKEKPNSLKPLALLPEYDDAGNVQSYLHP
YEFELLKFEPPTEQLQKQKPVLPALMAETELMVVDTVEKLKQALEELRQAPQIAIDVEHH
SYRTFMGITCLVQMSTRSKDYIFDTLILRDDMHILNLVLTDPKKLKILHGADLDIEWLQR
DLSLYIVNMFDTHRAAKALNMARLSLAYLLKHYLDLDVDKSLQLADWRMRPLPQQLVDYA
RQDTHFLIYVYERMTNDLLQQQAEPGLLGSVYQQSTDVCKKRYNKPHIGPESHLDLVRKT
KRSFDNRQLYALRGIFEWRDATARSEDESYGYVLPNHMMLQIAESLPREMQGILACCNPI
PPLVRQQLHTLHQIVLKARDQPLVKPILEARSSTQASLPPSTKDFSSKLYCPHDFSHVEE
IRDDLPTLLKRSSTTGKLEVARKEEVAKVDPTLAAPAMALFEKQSKPTPEEEQRWAHLRK
ESQTLRMPYKRYLAILPLMVQLKADQLARERSELQKRQLCPAAPTVEQNIKLEANAIGKE
DDDMYSVPLKEQLKRKHPQANVKTDPDQQPTASKRPRKAESTQTKPPVKIEPVEKVQQAT
GESDDEVVEVPIERQATEPPKPSPAQNNRKQKKNQFQRGFKGKNRGNHPQSSSQQVPQHQ
GTGNFDYKNVDFRQFKGGAQRARGTEIKQQIRGKNRPNNRNNKQFNKLFTFSNVRKEGKK
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgagccccgaaaagagttcaccaggaggccaaagaggagtcggcccaagcagac
cagccgacgcagaattccgcttcagaagatatcgaggcattcacaaacaaagggttcaag
aatgcaatcgccgccacaaaagccgccaatgctttcccacaaggaacagcacgcgccctt
tacctgagctatccgggctacgcacgtgttattgaagacctgacccaacgggtggtggcg
ctcatcgggaacgtgctgcactccaaagacatcaagggcgacatcaaaaaacgccaaatg
gaagagcagtttgagatggtgcaggagtgcaacgacttactgtttgagcgcattacgacc
aatctggacattaaagctggtctgcgaagaaatacccaacaggtcgtagaggcccaggtg
gacgtgatgaccagctccacatccatagaacccgcagtagctgctccacaaacccaagga
actccaaaggctggcagctggaacagaacgacaggaacaccgcaacgcaacatggtttcc
actcgtctcttcaccgccaagaacatcattcgaccgcagacgcaatttagggagccggtg
gataacagtgcccagaatccgtttgttccaagactcaaggagaaacctaattctcttaaa
ccgctggccctgctgcccgaatacgatgatgccggcaatgtccaatcctatttgcatccc
tacgagtttgagctgcttaagtttgagcctccgacggagcagctccaaaaacaaaagcca
gtgcttccagcgctgatggcagaaaccgaactaatggtggttgacacggtggaaaaactg
aagcaggcactggaggaacttaggcaagcgccccagatcgccatagatgtggagcaccac
tcgtatcgcaccttcatgggcatcacttgcctggtccagatgtctactcgcagcaaggac
tatatttttgataccctgatcctacgcgatgatatgcatatactaaatttggtactcacc
gatcccaagaagctgaagatcctgcacggcgccgatttggacattgagtggctgcagcgc
gacttatccttgtatatcgtcaacatgttcgacacgcatcgggctgccaaagccttgaac
atggccaggttatcgttggcatatttgcttaagcactatttggacttggatgtggacaag
agcctgcaactggccgattggcgaatgaggccgctcccccagcagctggtggactacgct
cgtcaggatacccactttttgatatacgtttacgaacggatgacaaacgatctgctgcag
cagcaggccgaaccgggactgctgggcagtgtctatcaacagagcacggatgtctgcaag
aagcggtataataagcctcacatcggaccagaatctcatttggatttagtacgaaaaacg
aagcgctctttcgacaaccggcaactgtacgcccttcgcgggatcttcgagtggcgcgat
gctacggcgcggtcagaggacgagagttacggctatgtgctgcccaatcacatgatgctg
caaattgctgagagtcttccaagggagatgcagggaatcctcgcctgctgcaatcccatt
ccgccattggtgcgccaacagctgcacacgcttcaccagattgtcctcaaggcgcgcgat
cagccgctggtcaaacctatcctggaagcccggagcagtacacaggcatcgttgcctccc
tcgaccaaagactttagcagcaagctctactgtccgcatgatttttcgcatgtggaggag
attcgcgacgacctgccaacgctgttaaaacgtagttcaactacaggaaaactggaggtg
gcccgaaaggaggaggttgccaaagtagatccgaccttagcggcaccagccatggctctg
ttcgaaaagcagtccaagccgacaccagaagaggagcagcgctgggcccatcttcgcaag
gagagccagacactgcgtatgccctacaaacgttacctcgccatcctgccgttgatggtg
cagctgaaggccgatcagttggccagagagcgaagcgagttgcaaaagaggcaattgtgt
ccagcggccccaactgtggagcaaaacattaagctggaggcaaacgccatcgggaaggag
gatgatgacatgtactccgttccgctgaaggaacaactgaagcgcaagcacccacaagcg
aacgtgaaaacagatccggatcagcagccgactgctagcaaacgacctcgcaaagctgag
agcacacaaaccaaaccgccggtgaagatcgaaccagtcgaaaaagttcagcaggctaca
ggcgaaagcgatgacgaggtcgtggaggttcctatcgaaagacaagccacagagccacca
aaaccatcgccggcacagaacaatcgcaagcagaagaagaatcagttccagcgcggattc
aagggcaagaatcgaggaaaccacccgcagagctccagtcagcaggttccgcagcaccag
ggtacaggtaactttgactacaagaacgtggacttccggcaattcaagggaggagcgcaa
agggcacggggcacagaaattaagcaacaaattcgcggcaagaaccgtcccaacaatcgc
aacaacaagcagttcaacaagctttttacattcagtaatgtaaggaaagagggcaaaaaa
taa
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