Drosophila sechellia: 6607281
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Entry
6607281 CDS
T01064
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
dse
Drosophila sechellia
Pathway
dse03013
Nucleocytoplasmic transport
dse03015
mRNA surveillance pathway
dse03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6607281
09122 Translation
03013 Nucleocytoplasmic transport
6607281
03015 mRNA surveillance pathway
6607281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dse03019
]
6607281
03041 Spliceosome [BR:
dse03041
]
6607281
03009 Ribosome biogenesis [BR:
dse03009
]
6607281
03012 Translation factors [BR:
dse03012
]
6607281
Enzymes [BR:
dse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
6607281
Messenger RNA biogenesis [BR:
dse03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
6607281
mRNA cycle factors
Stress granule specific factors
6607281
Spliceosome [BR:
dse03041
]
Complex C
Other components
EJC/TREX
6607281
Ribosome biogenesis [BR:
dse03009
]
Eukaryotic type
90S particles
Helicases
6607281
Translation factors [BR:
dse03012
]
Eukaryotic type
Initiation factors
eIF-4
6607281
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UvrD-helicase
TniB
AAA_30
Motif
Other DBs
NCBI-GeneID:
6607281
NCBI-ProteinID:
XP_002032060
UniProt:
B4HLL9
LinkDB
All DBs
Position
3R:complement(20064290..20065905)
Genome browser
AA seq
399 aa
AA seq
DB search
MARKNAQAEDLSNVEFETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPI
VKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQILCLSPTRELAVQIQKVILALGDM
MNVQCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEM
LNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIK
QFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMP
QKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFG
RKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcaagaatgcacaggcggaggacctctcgaacgtggagttcgagacgagcgag
gatgtggaggtgatacccacattcaacgccatgaatcttaaggaggagctgctacgcggc
atctacgcgtacggcttcgagaaaccctcggccattcagcaaaggagcattacccctatc
gtcaagggacgggatgtgattgcccaggcacaatcaggcacgggcaaaaccgccaccttc
tccatctccattctgcagagcctggacaccacgctgcgggagacgcagattctgtgcctg
tcgcccactcgcgagttggctgtgcaaatccagaaagtcattctcgccctcggcgacatg
atgaatgtccagtgccatgtgtgcatcggtggcaccaacctgggcgaggatatccgcaaa
ctggactacggtcagcacattgtgagcggcactcccggacgagtgttcgacatgatcaag
cgacgggtgctgcgaacaagagccatcaagatgcttgtgctggacgaagctgacgagatg
cttaataaggggttcaaggaacagatatacgatgtgtatcgctacttgccaccagccacc
caggtggtgctcatctcggccaccttgccccacgagatactcgagatgacctccaaattc
atgacagatcccattcgcatcttggtcaagcgtgacgaattgacgctggaaggcatcaag
cagttcttcgtcgccgtggagcgcgaggaatggaaattcgataccctgtgcgatctgtac
gatactctgaccatcacccaggccgtcatcttctgcaacacgaaacgcaaggtggactgg
ctgacggagaagatgcgcgaggctaactttacagtcagctcgatgcacggcgatatgccg
caaaaggagcgtgacgagatcatgaaggagttccgagccggccagtcgcgagtgctcatc
accaccgatgtgtgggctcgtggtatcgatgtgcagcaggtgtcgctggtcatcaactac
gatttgcccaacaaccgtgagctgtacatccatcgtatcggtcgttctggtcgtttcgga
cgcaagggtgttgctattaactttgtcaaatcggacgatatccgcatcctgcgcgacatt
gagcagtactactccacacaaatcgacgagatgcccatgaacgtggctgacttgatctaa
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