Drosophila sechellia: 6607298
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Entry
6607298 CDS
T01064
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
dse
Drosophila sechellia
Pathway
dse03030
DNA replication
dse03420
Nucleotide excision repair
dse03430
Mismatch repair
dse03440
Homologous recombination
dse03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
6607298
03420 Nucleotide excision repair
6607298
03430 Mismatch repair
6607298
03440 Homologous recombination
6607298
03460 Fanconi anemia pathway
6607298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dse03000
]
6607298
03032 DNA replication proteins [BR:
dse03032
]
6607298
03400 DNA repair and recombination proteins [BR:
dse03400
]
6607298
Transcription factors [BR:
dse03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
6607298
DNA replication proteins [BR:
dse03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
6607298
DNA repair and recombination proteins [BR:
dse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
6607298
MMR (mismatch excision repair)
6607298
DSBR (double strand breaks repair)
HR (homologous recombination)
6607298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
6607298
NCBI-ProteinID:
XP_002032077
UniProt:
B4HLN6
LinkDB
All DBs
Position
3R:20114068..20116313
Genome browser
AA seq
603 aa
AA seq
DB search
MVLASLSTGVIARIMHGEVVDAPVLQILAIKKINSAADSERYRILISDGKYFNSYAMLAS
QLNVMQHNGELEEFTIVQLDKYVTSLVGKDGAGKRVLIISELTVVNPGAEVKSKIGEPVT
YENAAKQDLAPKPAATSNSKPVAKKEPIHNNNNNVVMNSSINSGMTHPISSLSPYQNKWV
IKARVTSKSGIRTWSNARGEGKLFSMDLMDESGEIRATAFKEQCDKFYDLIQVDSVYYIS
KCQLKPANKQYSSLNNAYEMTFSGETVVQLCEDTDDDPIPEIKYNLVPISDVSGMENKAA
VDTIGICKEVGELQSFVARTTNKEFKKRDITLVDMSNSAISLTLWGDDAVNFDGHVQPVI
LVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRGWFDNGGGDSVANMVSARTGGGS
FSTEWMTLKDARARNLGSGDKPDYFQCKAVVHIVKQENAFYRACPQSDCNKKVVDEGNDQ
FRCEKCNALFPNFKYRLLINMSIGDWTSNRWVSSFNEVGEQLLGHTSQEVGEALENDPAK
AEQIFSALNFTSHIFKLRCKNEVYGDMTRNKLTVQSVAPINHKEYNKHLLKELQELTGIG
SSN
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggtcttggcatctttgtccactggtgtgattgctcgcattatgcatggcgaggttgtg
gatgcaccggttctccagatcctggcaatcaagaagattaacagcgccgcggactcagag
cgctatcgcatcctgatctccgacggcaagtactttaacagctatgcgatgctggccagt
cagctgaacgtgatgcagcacaatggagaactagaggagttcaccattgtccagctggat
aaatatgtgacctcactggtgggcaaggacggagccggcaaacgcgttcttatcatttcc
gaactgacagtggtgaatcctggcgccgaggttaagtctaaaattggcgaacccgtcact
tatgaaaatgcagccaagcaggatctggcgcctaagccagcagcaacatctaattccaag
ccagttgccaaaaaggaaccaatccacaacaacaataataacgttgtaatgaattcgtct
attaatagtggaatgacacatcccatttccagcctgagtccctaccaaaataagtgggtg
attaaggctcgggtaacctcaaaatccggtattcgcacctggagcaatgcccgcggcgag
ggcaagttgttcagcatggatttaatggacgaatcgggcgaaattcgggccactgccttc
aaggaacagtgcgataagttctacgacctcattcaagtggacagcgtgtactatatatca
aagtgtcaattgaaaccggcaaacaagcagtactcttcgctgaacaacgcctatgagatg
actttttccggcgaaacagttgtccagctttgtgaggataccgacgatgatcccataccg
gaaattaagtacaaccttgttcctatttccgatgtgtcgggtatggaaaacaaagcagcg
gtggacacaattggaatttgcaaggaggtgggcgagctgcaatcattcgtagctcgcacc
acaaacaaggaattcaagaaacgggacataaccctagtggacatgagtaactcggccatc
agcttgaccctttggggggatgatgccgttaactttgacggtcatgtgcagcctgtgatc
ctggtcaagggaacgcgcattaacgagttcaatggcggaaagtccttgagcctcggcggt
ggctcaatcatgaagattaaccccgatatacccgaggcacataagctgcgcggctggttc
gacaatggaggtggtgacagtgtcgccaatatggtttcggcgcgaacgggcggaggaagc
ttctctactgaatggatgacgcttaaggatgcgcgggctcgcaatctcggcagcggcgac
aagcctgattacttccagtgcaaggcagtggtgcacattgtcaaacaggaaaatgctttc
taccgagcctgccctcagagcgactgcaacaagaaggttgtcgatgagggcaacgaccag
ttccgctgcgagaaatgtaacgcactgtttcccaacttcaagtaccgactgctgatcaac
atgagcatcggggactggacttccaaccgttgggtcagcagctttaacgaggtcggtgaa
cagcttctcgggcacacttcgcaggaagtgggtgaggcccttgagaacgaccctgccaaa
gccgagcagattttctcagcgctcaacttcacttcacacatctttaagctgcgctgcaag
aacgaggtttacggggacatgactcgcaacaagctcactgtgcagtctgtagcccctatc
aatcacaaggagtacaataagcacttgctcaaggagctgcaggagctaaccggcattggc
tcatcaaactga
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