Drosophila sechellia: 6607317
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Entry
6607317 CDS
T01064
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
dse
Drosophila sechellia
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dse03041
]
6607317
Enzymes [BR:
dse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
6607317
Spliceosome [BR:
dse03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
6607317
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
KH-I_KHDC4-BBP
CMS1
P-loop_SecA
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-GeneID:
6607317
NCBI-ProteinID:
XP_002032091
UniProt:
B4HM29
LinkDB
All DBs
Position
3R:complement(20253069..20255785)
Genome browser
AA seq
699 aa
AA seq
DB search
MSELDWDDPNYVEKPAVPQEYSKLNDKYERSIRRDGNSRGYKGERNDCGGRRDYRDNYGA
GCRDSRDSGSGGGGGEGFSESLSIASEMVGKVIGRGGSNVSRIQNDFNVRVKVDKYNLIV
KITGSIQSNVLDAIDHVRKQFTNSGDRGRDRDSRDHMSNERHDGGGGGGGYDKSKGSSYE
FNPPSSESNNDNGDLTGTIDWAALNKASIAATAARWSKCPPLTKNFYKEAPEVANLTKSE
IERIREENNKITVSYVFEPKEGETAPPIPNPVWTFEQCFAEYPDMLGEITKMGFPKPSPI
QSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRGGANVLVLAPTREL
ALQIEMEVNKYSFRGMKAVCVYGGGDRNMQISDLERGAEIIICTPGRLNDLIMANVIDVS
TITYLVLDEADRMLDMGFEPQIRKVILDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQV
CVGSLDLAATHSVKQVIKLMEDDMAKFNTITSFVKNMSSTDKIIIFCGRKVRADDLSSEL
TLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPRN
IEEYVHRVGRTGRAGRQGTSISFFTREDWGMAKELIDILQEAEQEVPDELHNMARRFKAM
KDKRAAEGGGFGGRGGRFGGGRGGGVRGGGRRNFDQFQY
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagctcgattgggacgatccaaactatgttgagaaaccggcggtgcctcaggag
tactccaagctaaatgataagtacgaaaggagtatccggcgagatggtaactcacgtgga
tacaaaggcgagcgaaatgactgcggtggacgtcgcgactatcgtgataattacggagcg
ggctgtcgtgatagtcgcgacagcggtagtggaggaggaggaggagaaggctttagcgaa
tccttgagcatcgcttccgagatggtcggaaaagttattggaagaggcggctccaatgta
tcccggatccagaacgacttcaatgttcgcgtcaaagtggacaagtacaacttaattgtc
aagataactggtagcatccagagcaacgtcctcgatgctatagatcacgttcgcaagcag
ttcactaattcgggtgataggggacgggatcgcgatagtagggaccacatgtccaatgaa
agacatgatggaggcggtggcggtggcggatacgacaaatccaaggggagtagctacgag
ttcaatcccccttcttctgagtccaataacgacaatggggatcttacgggcaccatcgat
tgggcagccctgaataaagcttcgatagcagctactgcggcacggtggtccaagtgtcca
ccgctaacaaagaacttttacaaggaggctcctgaagtggccaatctgacaaaatcggag
atcgaacgtattcgcgaggagaacaacaagataacagtttcttatgttttcgagcccaag
gagggggaaacggcgccgcctatcccaaatccagtttggaccttcgagcaatgctttgcc
gaatatccagatatgcttggggagattaccaaaatgggcttccccaaaccctcgcccata
caatcgcaggcgtggcccattctcctccaaggtcatgacatgatcggtatcgcccaaaca
ggcactggcaaaacactagcctttcttctgcccggaatgattcacactgagtaccagagt
acgccccggggcacgaggggcggagctaacgttctggtgctggcacccactcgggagttg
gctctgcaaatcgaaatggaggtcaacaagtactccttccgcggcatgaaagcagtttgt
gtgtacggcggtggcgatcgcaacatgcagatatccgacttggagcgcggtgcggagatc
attatctgcaccccgggtcgcctgaacgatctgataatggccaatgtcattgatgtgagc
accatcacttatctggtgcttgacgaggcagatcgcatgctggacatggggttcgagccg
cagatccggaaggtgattctagacatccgtccggaccgtcagaccataatgacgtcggcc
acttggccaccaggagtacgtcgtttagcgcagagctacatgaagaatcccatccaggtg
tgtgtcggatcgctcgatctggcggccacgcactcggtgaaacaagtgattaaattgatg
gaggatgacatggccaaattcaacaccattacatctttcgttaagaatatgagcagtacg
gacaagatcatcatattttgtggacgcaaggttcgtgctgatgacctatccagtgaactt
acgctggatggtttcatgacccagtgcattcatggtaaccgcgatcagatggatcgtgag
caggctatagccgatattaagtccggcgtcgtgcgcattctggttgctaccgatgtggca
tcacgtggcctggatattgaggatatcacgcatgtcatcaactatgattttccgcgcaac
atcgaggagtatgtgcaccgtgttggtcgcaccggacgtgctggccgacagggcacctca
ataagcttttttacccgcgaggattggggtatggccaaggaactaattgacattctgcag
gaggcggagcaggaagtgcccgacgaactgcacaacatggctagacgatttaaagccatg
aaggacaagcgcgctgctgaaggcggcggttttggaggaagaggtggtcgctttggtggc
gggcgtggcggcggtgtacgtggcggcggacgccgaaatttcgatcaatttcaatactga
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integrated database retrieval system
