Drosophila sechellia: 6607629
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Entry
6607629 CDS
T01064
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
dse
Drosophila sechellia
Pathway
dse03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6607629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dse03019
]
6607629
03036 Chromosome and associated proteins [BR:
dse03036
]
6607629
Messenger RNA biogenesis [BR:
dse03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
6607629
Chromosome and associated proteins [BR:
dse03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
6607629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
6607629
NCBI-ProteinID:
XP_002032397
UniProt:
B4HFZ0
LinkDB
All DBs
Position
3R:complement(22334990..22341970)
Genome browser
AA seq
1961 aa
AA seq
DB search
MFGGAKPSFGATPAATSFGGFSGTTTTTPFGQSAFGKPAAPAFGNTSTFAAQPAQQSLFG
AAATPAQPAGGLFGANTSTGFGSTATAQPTAFGAFSQPQQTSNIFGSTQTAATTSLFGQS
TLPAFGAAKPTMTAFGQTAAAQPTGSLFGQTAAATSTTGFGGFGTSAPTTTNVFGSGTAS
AFAQPQATAVGASGVNTGTAVAKYQPTIGTDTLMKSGQANSVNTKQHCITAMKEFEGKSL
EELRLEDYMCGRKGPQAGSAPGAFGFGAQVTQPAQPASGGLFGSTAQPSTGLFGQTVTEN
KSMFGTTAFGQQPATNNAFGAATQQNNFLQKPFGATNTTPFAAPAADASNPFGAKPAFGQ
GGSLFGQAPATSAAPAFGQTNTGFGGFGTTAGATQQSTLFGATPAADPNKSAFGLGTAAS
AATTGFGFGAPATSTAGGGLFGNKPATSFAAPTFGATSTASTPFSNFGLNTSTAATGGGL
FNSGLNKPATSGFGGFGATSAAPLNFNAGNTGGSLFGNTAKPGGGLFGGGTTTLGGTGAA
PTGGLFGGGTTSFGGVGGSLGGGGFAVSTNNSLTGGIMGAQPTLGIMTPSHQPIHHQILA
RVTSPYGDSPIFKDLKQSSEADATRATNPAAQQAVLDLTSNQYKISTSTNLAPMKAKALG
STLNRKSLFDGLEEFDASVEGFNLKPSAKRLIIKPKVKSVEGGNPSSSIGSASNTPQSRP
KGATPNKERESFSGAIPSEPLPPAGNSPGATNGRESQDNGRRESWLHPNNLEKVRQHNIQ
TGMDQGSPHNSTLNELVPRKPLDTYRPSSTVRLSVSTIPENPFEDQSSTIARRETFTSEQ
ANESVLSSRSNEAEDSAANRSRLAIEASAAEPADNESHPTGIVLRRVGYYTIPSLDDLRS
YLAEDGSCVVPNFTVGREGYGNVFFGKEIDVAGLNLDEIVHFRNKEIIIYPDDENKPPIG
QGLNRDAQVTLDQVWPLDKTKHEAIKDPQRLLEMDWEGKLRRVCDKNDTRFIEYRPETGS
WVFRVKHFSKYGLGDSDEEDELPTDPKKVKIATLEAQQRANAEKMTLNSLRQAQKISEDA
ARNLDPKALVAGVASEFRPMDDTAEFLLMDKTQFFQAGGNSDFSMFDPPRHRPTITSPTA
VLAQEMVGNEAHKMQLMKSSFFVEDNAAEDELMETTGRLLRHRKLFNVEPNVWKDGASES
STSQYDFEHPSPALPISSSVSEASLMCDAQYEETSSMATGSIVAAVKEKKFEMPVTKAFK
FFCNPKVAPVKVHATTVSLPRSIAYEMRDNWIADLGFYKGRSFKLSFGPQNSLVLPSTYN
NMQNLKEFTGPSLPASMVFAPRLATDLSPSVMQLVEFNMVKGNEDFRESIVPHLEVQLND
CLSVNVEGSECPCIHPDSGTKLVSKHFSESLKQRNAGLKEDYAVSVWSLLFALWGDHDEL
VDLENNSHYMVMCRRNLLSEWLENTLLGKDLLSKKVSTHSYLEHMLDLLSCHRVNEACEL
AFSYDDANLALVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERLKMYMLAAGAPMMQ
SSHGAINLLENKNWLTVLALQLWYFTAPTSTITDALNAYNDAFQAEECYAEPPKPSYKNA
PSDTKKPVYDLRYHLLQLHSKRMHSLEETLDPITHTADVMDFRLSWLLLQTLRALGYRHC
SPLTEARLSVDFASQLENEGLWQWGIFVLLHIKQQTQRERAVQQMLQRNVSVSAKVALYA
EERFIVEELGIPMSWVDYAKAVKAGALGKHHLQAKYLLKAKHFATAHDVIFQHIAPDAII
NGKMKYLHSLLIQFEDTEGSSIRVPNWANQGQIFLDFIDINAKFKQIRSVTNIADINARW
ENLKPQLSELCSRISLLPCPTSKHRLCQSEISQSLSCLVHGMCIVCPEMESSTVLRVALE
RLPLPQEFASKELRIWLEELLDKIQSQPPFSERQQTTMMEI
NT seq
5886 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcggcgcgaaacccagcttcggagctactccggcggccaccagctttggtgga
ttcagcggcaccacgacaacaactccgtttggccaatcggcatttggcaagcccgccgca
ccggcctttggaaacacctccacctttgccgcccaacccgcgcagcagtcactgttcggt
gcggcagccacaccagctcagcccgccggaggcttattcggggcaaacacgtccacgggc
tttggaagcactgccacagctcagcccacggcctttggagccttctcgcagccgcaacag
acctcgaatatatttggatccacccagacggcggcgaccacctccctttttggacaatcg
acgctacccgcctttggagccgccaaaccgacgatgacggcctttggacaaacagctgct
gcccagcccacgggctctttgtttggccaaacggctgccgccaccagtacaacaggattc
ggaggctttgggacgtcggcgcctacaaccaccaatgtttttggcagtggcaccgcctcc
gcctttgcccaacctcaggccaccgccgtgggagcttccggagtcaatacgggcacggcc
gtggccaagtaccagccaaccattggtacagataccttgatgaaaagcggtcaggccaat
agtgtgaacactaagcagcactgcatcacggctatgaaggagttcgagggcaaatctctg
gaggagctccgcctggaagactatatgtgcgggcgcaagggtccacaggctggcagtgct
ccgggagcttttggatttggagctcaagttactcagcccgctcagcctgcaagtggtggc
ttgtttggaagcactgcccaaccaagcacaggcctgtttggccaaacggtgaccgagaat
aagagcatgtttggaaccaccgcttttggccaacaaccagcgactaacaatgcgttcgga
gcagcgacccagcaaaacaacttcctgcagaagccctttggagccaccaacaccacgcca
tttgccgctcccgcagctgacgcctcaaatccatttggggcgaagcctgcttttggacag
ggaggaagcctatttggtcaggcacctgctaccagtgcggctcctgctttcggacagact
aacaccggattcggaggctttggaaccacagccggagcaacgcaacagtcgacccttttt
ggtgccacaccagccgccgatccaaataaatctgcctttgggttgggaacggctgcatca
gcagccacgacaggttttggatttggagctccagccacaagcaccgccggcggaggcctt
ttcggaaacaagcccgccaccagcttcgctgctccaactttcggcgcaacctccacggcc
agcactccgttttcaaactttggcctgaacaccagtacagcagcaacgggtggagggcta
tttaactcgggattgaacaagccagcaacgtccggatttggaggttttggagccaccagc
gcagcaccacttaatttcaacgcaggcaacacgggcggatcactgttcggaaatacagcc
aagccgggaggcggtctttttggtggaggtactactaccttgggtggcacaggagctgcc
ccaacgggcggactgtttggaggaggaactaccagtttcggaggtgtcggtggttccttg
ggcggaggaggcttcgctgtgagtacaaacaactcgttaactggtggtattatgggagct
cagcccacactgggaatcatgacaccttcgcatcagcccattcatcatcagatactagct
agggtaacttcaccctacggagactctccgattttcaaggatctaaagcaaagcagtgag
gcagatgcaacaagagctacaaatcctgctgcccaacaagcagttctggacctgaccagc
aaccaatacaagataagtaccagcaccaatcttgctcctatgaaggcaaaggcgctaggc
agcacacttaatagaaaatcgctgtttgatggtctcgaggagtttgatgcttctgtagag
ggcttcaatctcaagcccagtgctaaacgattaattattaaacccaaagtaaaaagtgta
gagggtggaaatccttctagctctattggcagtgcttccaacacgcctcaatctcgtccc
aaaggcgcaactcccaataaagaacgcgagtcgtttagcggagccattccaagtgagcct
ctaccaccagctggaaactcgcctggagcaacgaatggacgggaaagtcaggataacggc
cgccgtgagtcatggctgcatcctaacaacctcgagaaagtacgccagcacaacattcag
actggaatggatcagggatcgccccataacagcaccctcaatgagcttgtcccacgtaaa
cctttggatacataccgaccatcctccaccgttcgcctctcggtgtcgaccatcccagag
aatccgtttgaggatcaatccagcacaattgcacgtcgcgaaaccttcacttcggagcag
gccaatgagagcgtgctttcgagcagatctaatgaggcagaggactctgcagcaaaccga
tcccgccttgccattgaggcaagtgctgcagagccagcagacaacgagtcccaccccaca
ggcattgtgctgcgacgtgtgggttactatacaattccatcgctggacgacctgcgctcc
tatctggccgaggacggatcctgtgtggttccgaactttacggtgggtcgggaaggatac
ggcaatgtgttcttcggcaaggaaattgatgtggctggcctgaacctcgatgagattgta
cactttcgcaacaaggagatcatcatttatcccgacgacgaaaacaagccgcccattggt
caaggcctaaaccgtgacgcccaggtcactttggaccaagtatggccgttggacaagacc
aagcacgaagccatcaaggatccacaacgcttgcttgagatggactgggagggcaagttg
cgccgggtgtgcgataaaaacgatacgcgctttatagaataccgcccggaaacgggtagt
tgggtcttccgcgtcaagcacttctctaaatatggtctgggagacagcgacgaggaggac
gagttgcccaccgatccaaaaaaagttaaaattgcaacgcttgaggctcagcagcgggca
aacgcagaaaagatgacgctcaattcgctgcgccaagcgcagaagatttcagaagacgca
gcccgtaacttggacccaaaggccttggtcgcaggtgttgccagcgaattcaggccaatg
gatgataccgccgagttccttttaatggacaaaacacaatttttccaagctggtggcaac
tccgatttctccatgttcgatccaccgcgtcatcgtccaacgattaccagccccaccgct
gttttggctcaggagatggttggcaacgaagcgcacaaaatgcagctaatgaagtcatcc
ttttttgtagaggacaatgctgccgaggacgagctcatggagactacggggcgtcttctt
cgtcatcgcaagcttttcaacgtggaacctaatgtttggaaagatggtgcctccgagagc
tccaccagtcagtacgattttgaacacccatcgcccgctcttccaatttcttcctccgtc
tctgaggccagcctgatgtgtgatgcacagtacgaggagacatcgtcgatggcaactgga
agcattgttgcagctgtaaaagaaaagaagtttgaaatgcctgtcactaaagccttcaag
tttttctgtaatcccaaagtggctccggttaaggtgcatgccaccacggtttccctaccc
aggtccattgcttatgagatgcgcgataattggatcgccgatttgggattctataaagga
cgcagctttaagctcagttttggcccacaaaactcattggtactgcccagcacctataat
aacatgcaaaacctaaaagaatttactggaccatccctgcccgcctccatggtatttgcg
ccccgcttagccaccgatttgtcgcccagcgtaatgcagttggtggagtttaacatggtt
aaaggcaacgaggattttcgagaaagtatcgttccccatcttgaggttcagcttaacgac
tgcctctcagttaatgtggagggtagtgagtgtccgtgtatacatcccgatagcggtacg
aaactagtttccaagcacttctccgagtctcttaagcagagaaatgctggcttaaaagag
gactatgccgtgtcagtgtggtcgcttttgttcgcactatggggcgatcacgatgagctg
gtggacctggaaaacaactctcattacatggtcatgtgtcggcgcaatctgctatccgag
tggcttgagaacacgctgttgggcaaggatttactctcgaaaaaagtgagcacccacagc
tacctggaacacatgttggacttacttagctgccaccgcgtaaatgaggcttgtgagttg
gccttcagctacgatgatgctaatctggctcttgtgctgtcccaattaagttccggagct
gtcttccggctattaatggaggagcagctctttgcctggcagcagagcaagtcggataag
tacatcgatctggagcgcctcaagatgtacatgctggccgccggagcgcccatgatgcag
tcttcacatggggccatcaacttactcgagaataaaaactggctgacagtactggccctg
cagctgtggtatttcacagccccaacctcgaccatcaccgatgcactcaatgcttataac
gacgccttccaagcggaagagtgctatgcggagcccccgaagcccagctacaagaacgca
cctagtgacaccaagaagcccgtctacgatttgcgctaccacttgctccagttacactct
aaacggatgcattcgctggaagaaactctcgatcctataacgcataccgccgatgtcatg
gacttccgtttgagctggctgctcttgcaaacactgcgagctcttggctaccgccactgt
tcgcccttaacggaggctcgtctttcggtggatttcgctagccagttggagaacgaaggc
ctctggcagtggggtatcttcgttcttttgcatattaagcagcagacccagagggaacgc
gcagttcagcaaatgctacagaggaatgtcagcgtttccgccaaggtggctctatatgcg
gaagagcgctttatcgtcgaagagcttggtattccgatgtcgtgggtggactatgcgaag
gcggtaaaggcgggagcgttaggaaaacatcaccttcaagcgaaatatctgttaaaggct
aaacattttgctaccgcacacgatgtcatcttccaacacattgctcctgatgccatcata
aacggtaaaatgaaatacctgcatagcctgctcattcagttcgaggatacagagggcagc
agcatccgagttcccaactgggccaaccagggccagatcttcttggactttatcgacatc
aatgccaagttcaagcagatccgcagtgtgaccaacatcgctgacatcaatgcgcgctgg
gagaacttaaaaccacaactaagcgaactctgctcccgcatcagtctgctcccgtgcccc
acctccaagcaccgcctgtgccagagtgaaatctcgcagagcctcagctgcttggtgcac
ggcatgtgcattgtctgtcccgagatggagtcttccacagtgcttagggtggccctagag
cggctgccactgccgcaggagttcgcctcaaaggagctgcgcatctggctggaggagcta
ctggacaaaattcaaagccagccaccatttagcgagcggcagcaaaccaccatgatggag
atatag
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