Drosophila sechellia: 6608764
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Entry
6608764 CDS
T01064
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
dse
Drosophila sechellia
Pathway
dse03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6608764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dse03041
]
6608764
Spliceosome [BR:
dse03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
6608764
Complex C
U5 SnRNP specific factors
6608764
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
6608764
NCBI-ProteinID:
XP_002033487
UniProt:
B4HNY5
LinkDB
All DBs
Position
2R:complement(8311055..8319805)
Genome browser
AA seq
2396 aa
AA seq
DB search
MSIPPYMIPQNAWAAQLMAQQAYAAAHAQQAQLHAQQQMANQIQQIPPPGAPLPPAGGHP
NGIPIPAGGQGPGLGQIPTPKPDILTEEKLQEKALKWQHLQSKRFAEKRKFGFVDTQKED
MPPEHIRKIIRDHGDMTSRKYRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVQVLY
HITGAITFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NVLDVEPLEAIQIELDNDEDNAVYKWFYDHRPLVDTQFVNGTTYRKWNLSLPQLATLYRL
ANQLLTDLVDNNFFYLFDPKSFFTAKALNMAIPGGPKFEPLIKDHNVGDEDWNEFNDINK
VIIRQPIRTEYRIAFPYLYNNMPHFVHLSWYHTPNVVYIKTEDPDLPAFYFDPLINPISH
RNANSKIQEPLPDDDEDFTLPDDVQPFLQDTPLYTDNTANGIALLWAPRPFNMRSGRSRR
AIDVPLVKCWYKEHCPPGHPVKVRVSYQKLLKYYVLNALKHRKPKPQKKRYLFRSFKATK
FFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREILRLTKLIIDSHVQYRLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQF
EGRHSKGVAKTVTKQRVESHFDLELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPIPIENMILRYVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYISPEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLIPVYEVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPSDTEPPPLLAYKWCQGIN
NLQDVWDVGEGECNVLLESRFEKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFSSFITQYYGLVLDLLVLGLHRSSEMAGPPQMPNDFLTFQDTVTE
TAHPIRLYCRYVDRIHLFFRFSAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTIGWESTFVSVYSKDNPNLLFNMSGFECRILPKC
RTQNEEFTHRDGVWNLQNEITKERTAQCFLRVDDESLGRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRT
EFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFPAYKWNVSRPSLLADTKDTMDNTTTQKYWLDIQLRWGDYDSHDVERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGCKTLIQQAMAKIMKANPAL
YVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNTERTKIILKPDKTTITEAHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQNQLT
ATTTRTTNKHGDEIITSTTSNYETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKET
GYTYILPKNILKKFVTISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMPPQWGTHQTINLP
NTLPTHQYLKDMEPLGWIHTQPNELPQLSPQDITTHAKIMQENSNWDGEKTIVITCSFTP
GSCSLTAYKLTPSGFEWGSKNTDKGNNPKGYLPSHYERVQMLLSNKFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHELHRTSHFLLFSNLEDGGDGAGADREDVYA
NT seq
7191 nt
NT seq
+upstream
nt +downstream
nt
atgtccattccgccgtacatgataccgcagaatgcgtgggcagcccagctgatggcccag
caggcctacgcggctgcccatgctcagcaggctcaactgcacgcccagcagcagatggcc
aaccagatccagcagattccgccaccgggtgctccgctgccgccggccggtggccacccc
aacgggataccgatcccggcgggaggtcagggacccggattgggccagattcccacgccc
aaaccggacatactcaccgaggagaagctgcaggagaaggcgctcaaatggcagcatctg
cagtccaagcgattcgctgagaagcgcaagtttggctttgtggatacccaaaaggaggat
atgccgccggagcacatcaggaagatcattcgcgatcacggagatatgacgtcgcgcaag
tatcgtcatgacaagcgagtctacctcggagccctgaagtacatgccacatgctgtgctc
aagctgctggagaacatgcccatgccatgggagcagatccgggatgtccaggtgctgtac
cacattacgggagccatcacctttgtcaatgagattccctgggttattgagcccgtctac
atagcacaatggggaacaatgtggatcatgatgcggcgtgagaaacgcgatcgtcgccac
tttaaacgtatgagattcccgccatttgacgatgaggagccgcctctagactatgccgac
aacgtgctggacgtggagcccttggaggcgattcaaattgagctggacaatgatgaagac
aatgccgtatacaaatggttttatgaccatcgacctctagtggatacacagtttgtaaac
ggcactacttaccgaaagtggaatctttccctgcctcagctagccacgctgtatcgattg
gccaaccaattgctcaccgatctagtggacaataacttcttttatctgtttgacccaaaa
agttttttcaccgccaaggctcttaatatggccattccaggtggacccaagtttgaaccc
ctcattaaggaccacaatgttggggacgaggattggaacgagttcaacgacattaacaaa
gtcattatccggcagccaattcgcacggaataccgcattgccttcccttacttgtacaac
aatatgccgcactttgtgcatttgagctggtatcacactcccaacgtggtctatatcaag
accgaagatcccgatctgcctgcattttactttgatccgctcatcaatcccatatcccat
cgcaatgcaaactcgaagattcaggagccgctgcctgatgacgatgaggactttactctt
ccggacgacgtgcagccgttcctgcaggacactcccctgtacactgacaatactgcaaac
ggaatcgccttgctatgggcaccccgcccctttaatatgcgctctggtcgctcccgtcgt
gccatcgatgtaccgctggtcaagtgctggtacaaggagcactgtccacctggacatccg
gttaaggtgcgcgttagctaccagaaactgctcaaatactatgtgctcaatgccctaaaa
catcggaaaccaaagccacaaaagaaacgctacctcttccgttcgtttaaggccactaaa
ttcttccagaccacaactctggattgggttgaggctggactgcaagtttgtcgtcaggga
tacaatatgctgaaccttttgattcaccgaaaaaatcttaactacttgcatttagattac
aattttaacttgaagcccgttaaaactctgaccaccaaggagcgtaagaagtcgcgattc
ggaaatgctttccatttgtgccgtgagatcctgcgtttgaccaagctaatcattgactct
catgttcagtatcggctaaacaatgtggacgcctttcagttggctgacggactgcagtac
atattcgctcatgttggccagctgactggcatgtatcgctataaatacaagctgatgagg
cagattcgaatgtgtaaggatctgaaacatttgatatactatcgcttcaacacggggccc
gttggcaaaggacccggatgtggcttttgggcacctggatggcgagtctggctgttcttt
atgcgcggcatcactccgctactggaacgctggctgggcaatctattgtcgcgtcagttc
gagggtcgtcactccaagggtgtggccaagacagtgactaagcagcgtgttgaatcccac
tttgatctggagttgcgggcctccgtgatgcacgatattgtggacatgatgcccgagggc
atcaagcagaacaaagctcgtaccattttgcagcatttatcggaggcatggcgttgctgg
aaggcgaacattccgtggaaggtgcccggtctacccattcccattgagaatatgatcctg
cgttacgtgaagatgaaagccgactggtggacgaatacggctcactataatcgggaacgt
atacgacgtggagcaactgtggacaagacagtgtgcaagaagaatctggggcgactaaca
cgcctttatctgaaggcggagcaggagaggcagcacaactacttaaaggatggtccatac
atatcaccggaggaggctgtggctatttacacaaccaccgtccattggctggagtcacgt
cgctttgcgcccattcccttcccaccactttcgtacaaacacgataccaagctgctgatt
ttggctcttgagaggctaaaagaggcgtacagcgttaagtccaggcttaatcaaagtcag
cgtgaggagctgggcctcatcgaacaggcctacgacaatcctcacgaggcattgtcccgc
atcaagcgtcatctgctcacgcagcgagcgttcaaggaggtgggcattgagttcatggac
ttgtacagccatctgattccagtctacgaggtggaacccctggaaaagatcacagacgca
tatttggatcagtatctgtggtatgaggctgacaagcgtcgattgtttccgccatggatc
aagcccagtgacacggagccaccaccattgttggcctacaagtggtgtcaaggcattaac
aatctgcaggatgtgtgggatgtgggtgagggcgagtgcaatgtgctgctggagtccaga
tttgaaaagctgtacgagaagattgacttgacgctgcttaatcgtttgctccgcctgatt
gtcgatcacaatatcgccgattacatgacggccaagaacaacgttgtgatcaactacaag
gacatgaaccacacgaacagctacggcatcattcgcggtctgcagttttcatcgttcatc
acacagtactatggactggtgctagatctcttggttttgggtctccatcgatccagcgag
atggctggtccaccccaaatgccgaacgacttcctcacgttccaggacacagttactgaa
acggcacatcctattcgattgtactgccgctatgtggatcgtattcacttgttcttcaga
ttctcggcggaggaggcgcgcgatctgatccagcgctatcttaccgagcatccggatccg
aacaacgaaaacattgtgggctacaataacaagaagtgttggccacgcgatgcgcgcatg
cgtttgatgaagcacgatgtgaacttgggtcgtgcagtcttctgggacattaagaaccga
ctacctcgctctgtgaccaccattggttgggagagcactttcgtttcggtgtattccaag
gacaatcccaatctgctgttcaacatgagtggatttgagtgtcgcattttgccaaagtgt
cgcacccagaatgaagagtttacccatcgtgatggtgtttggaatttacagaacgaaatc
acaaaggaacgcactgcccagtgcttcctgcgggtggatgatgagtcattgggtcgtttc
cataatcgtgttcgacagatcctgatggcctctgggtccactacgttcacaaaaattgtg
aacaaatggaacacagcgctcataggcttgatgacctacttccgcgaggctgtagtcaat
acccaggaacttttggacctgttggtcaagtgcgagaacaaaattcagactcgcatcaag
attggcctcaactctaagatgccttcccgtttcccgcccgttgtgttctacactcccaag
gaactgggcggtctgggaatgttgagcatgggtcacgtcttgattccgcaatccgatctc
cgttggtccaagcaaactgatgtgggcataacccacttccgctccggtatgtcgcacgat
gaggatcagcttattcccaatctgtatcgatacattcagccgtgggagagtgagtttata
gactcgcagcgagtttgggcggagtacgcattgaagcgtcaggaggcgaatgcccagaac
cgtaggctcacactggaggatttggaggatagctgggatcgcggtattccacgtatcaac
acattattccaaaaggatcgtcacacactggcctacgacaagggctggcgcattcgtacc
gagtttaagcaataccaggtgcttaagcagaatcccttctggtggacgcatcagcgtcac
gatggcaagctgtggaacctgaacaattaccgcacggatatgatccaggcgttgggtgga
gtggagggcatactggagcacacgctgttcaagggcacctacttccccacgtgggagggt
cttttctgggaaaaggcttccggtttcgaagagtcaatgaagtacaagaagttgaccaat
gctcagcgatcgggtctcaaccagattccgaatcgtcgattcacactttggtggtcaccg
actatcaatcgagcgaatgtgtacgtcggtttccaggtgcaactggatctgactggtata
ttcatgcacggcaagattccgacactgaagatctcgctgattcaaatattccgtgcccat
ttgtggcagaagatccacgagtcgattgtcatggatttgtgtcaggtgttcgatcaggaa
ctggacgccttggaaatcgagacggtgcagaaggaaaccatccatccacgtaagtcctac
aagatgaactcgtcgtgtgccgacatcctgctcttccccgcctacaaatggaatgtgtcg
cgaccttcgctgctggccgataccaaggacaccatggataacaccaccactcaaaagtac
tggctggatatccagttgcgttggggcgattatgactcgcacgacgtggagcgctatgcc
agggccaagttcctcgattacaccactgacaacatgtccatctatccctcaccgacgggc
gtgttgattgccatcgatttggcctacaatctgcactcggcctacggcaactggttcccc
ggctgcaagaccctcattcagcaggccatggccaaaattatgaaggcaaaccccgcgctc
tatgtgctgcgtgagcgcatccgcaaggcgttgcagctgtactcttcggagccaacggag
ccgtacctcagttcgcagaattacggagagctgttctcgaaccagatcatctggtttgtg
gacgacaccaacgtgtatcgtgtcaccatacacaagacgttcgagggaaatctgacaacg
aagcccattaacggagcaatcttcatctttaatccgcgaaccggtcagctcttccttaag
atcatccacacctctgtgtgggctggccagaagcgtttgggccagctggccaagtggaag
actgctgaggaagtggccgctttgattcgatcattgccggttgaggagcagcccaaacaa
attattgtgacgcgcaagggcatgttggacccgctggaggtgcacttgctcgacttccca
aacattgtgatcaagggctctgagcttcagctaccgttccaggcttgtctcaaagtcgag
aagtttggtgacctcattctaaaggctaccgagccacagatggtgctcttcaacctgtac
gacgattggctaaagaccatctcttcatatacggctttcagtcgacttatcctcattctg
cgcgctctccacgtcaatacggagaggacaaagatcatactgaagccggacaagaccacc
ataacggaggcgcatcatatttggcccactctgaccgacgaggaatggattaaggtggaa
gtgcagctgaaggacctcattctcgccgattacggcaagaagaacaacgtaaatgtggcc
tcgctaactcagtccgagatccgtgacatcattctgggcatggagatcagtgcgccctca
gcgcagcgccagcagattgctgagatcgaaaagcagaccaaggagcaaaaccaactgacg
gccacgactacgcgtaccacaaacaagcatggtgacgaaattataacctccactacatcc
aattacgaaacgcagacgttcagctcgaagacagagtggcgagtaagagctatctcagcc
accaatctgcacctgcgaacgaatcacatctacgtaagctcggacgacataaaggagacc
ggctacacctacatcctgcccaagaacatactcaagaagtttgtcacgatctcggatctg
cgggcccagatagctggctacttgtacggtgtgagtccaccggacaatccgcaggtaaag
gagattcggtgcatcgtaatgccgccgcagtggggcactcaccagacgatcaacttgccc
aacaccctgcccacgcatcagtatctcaaggacatggaaccgctaggatggatccacacg
cagcccaacgagctgccccaattgtcaccgcaggacattacgacgcacgcgaagatcatg
caggagaactccaactgggatggcgagaagacgatcgtgatcacgtgctcctttacgccc
ggctcctgctcccttacggcctacaagctgacgccttcgggcttcgagtggggctccaag
aacacggacaagggtaacaatcccaagggatacctgccttcgcactacgaacgcgttcag
atgctgttgtcgaacaagttccttgggttcttcatggtgccagcgcaaagcagctggaac
tacaacttcatgggcgtgcgccacgatcccaacatgaagtacgaactgcagttggccaac
ccgaaggagttctaccacgagctgcatcgcacctcgcatttcctgctcttctcgaatctc
gaggacggcggcgatggtgccggtgcggatcgggaggatgtgtacgcgtag
DBGET
integrated database retrieval system
