Drosophila sechellia: 6609009
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Entry
6609009 CDS
T01064
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
dse
Drosophila sechellia
Pathway
dse03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6609009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dse03019
]
6609009
Enzymes [BR:
dse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
6609009
Messenger RNA biogenesis [BR:
dse03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
6609009
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
MMR_HSR1
AAA_22
ATP_bind_1
AAA_18
TniB
CbiA
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
6609009
NCBI-ProteinID:
XP_002033714
UniProt:
B4HQJ2
LinkDB
All DBs
Position
2R
Genome browser
AA seq
423 aa
AA seq
DB search
MSEDHGKDYTLESDSELRFEIEQKDAKVLVSLVSGFAELFGTELVKKKQYEFGVGAKVAI
FTYQGCVLHVSGKMDVCYISKETPMVQYVNCHAALEQFRMEAEEKDRYGPVAMVVGPMDV
GKSTLCRILLNYAVRVGRRPLYADLDVGQGSIAISGSVATILIERPANVEEGFAKTAPLV
YHFGHKSPSGNSVLYNAVVSKMAEVTLQSLNSNKRTKSSGIIINTCGWVKGSGYAHLLHA
AKAYGACAIFVLDQERLYNELLRDVPKEVHVVLLPKSGGVVERSKELRHEARDQRIKEYF
YGNARAPFYPFSFEVKFQDLRLYKIGAPPLPDSCMPIGMKAEDNKTKVVAVTPTPALIHH
VLALSFAESVEDDVIGTNVAGFCCVTEVDMERQAVMLLSPQPRPLPPNALLLWSELQFMD
NHT
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggaccatggcaaagactacactctggagtccgactccgagctgcgatttgaa
atcgagcagaaggacgccaaagtgttggtgtccctggtcagtggatttgcggagctgttc
ggcacggagctggtgaagaaaaagcagtacgagttcggtgtgggcgccaaggtggccatc
ttcacgtaccagggctgtgtgctccacgtttccggcaaaatggacgtgtgctacatctcc
aaggagacgccgatggtgcagtacgtcaactgccatgcggcactggagcaattccgcatg
gaggccgaggagaaggatcgctacggaccagtggccatggtcgtcggtcccatggacgtg
ggcaagagcactctctgccgcatcctgcttaactatgctgtgcgcgtgggtcgtcgaccg
ctgtacgccgacctggatgttggacagggctcgatagccatttccggcagtgtggccacc
attctcatcgagcgaccggcgaacgtcgaggagggattcgccaagacagcgccgctggtc
tatcactttggccataagtcgcccagcggtaacagcgtgctgtacaatgccgtggtttcc
aaaatggccgaggtaacgctgcaatccctaaatagcaacaagcgaacaaaaagctctggc
attattataaacacttgtggctgggtaaagggatccggctacgcgcacctgttgcacgcg
gccaaagcctatggagcctgcgccatcttcgtcctggaccaggagcgactatacaacgag
ctgcttcgggatgtgcccaaggaagttcatgtggttctcctgcccaagagtggcggcgtc
gtcgagcgcagcaaggaactgcgacacgaggcgagagatcagcgcatcaaggagtacttc
tacggcaatgcaagggcgcccttctatccgttcagcttcgaggtgaagttccaggacctg
cgactgtacaagatcggcgcaccgccgctgcccgactcctgcatgccaattggaatgaag
gcggaggacaacaagaccaaggtggtggcggttacacccacgcccgccctaatccatcat
gtgctggcactcagctttgccgagtccgtggaggacgatgtgattggcaccaacgtggcc
ggtttttgctgcgtaaccgaagtggatatggaaagacaggcagtgatgttgctttcgccg
cagccgcgacctttgcccccgaacgccctgctcctgtggtcggaactgcagttcatggat
aatcacacctag
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