Drosophila sechellia: 6609162
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Entry
6609162 CDS
T01064
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
dse
Drosophila sechellia
Pathway
dse03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
6609162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dse03021
]
6609162
Enzymes [BR:
dse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
6609162
Transcription machinery [BR:
dse03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
6609162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
CDC45
Motif
Other DBs
NCBI-GeneID:
6609162
NCBI-ProteinID:
XP_032571977
LinkDB
All DBs
Position
2R:complement(10693320..10698897)
Genome browser
AA seq
1642 aa
AA seq
DB search
MGSKRAMDVHMFPSDLEFAVFTDQEIRKLSVVKVITGITFDALGHAIPGGLYDIRMGSYG
RCMDPCGTCLKLQDCPGHMGHIELGTPVYNPFFIKFVQRLLCIFCLHCYKLQMKDHEREI
IMLQLRLIDAGYIIEAQELELFKSETVCQNTDNLVAIKNGDMVHPHIAAMYSLLEKNEKN
SSNSTKTSCSLRTAITHSALQRLGKKCRHCNKSMRFVRYMHRRLVFYVTLADIKERVGTG
AEAGGQNKVIFADECRRYLRQIYANYPELLKLLVPVLGLSNTEFTQGDRSPVDLFFMDTL
PVTPPRARPLNMVGDMLKGNPQTDIYINIIENNHVLNVVLKYMKGGQEKLTEEAKAAYQT
LKGETAHEKLYAAWLALQMSVDVLLDVNMSREMKSGEGLKQIIEKKSGLIRSHMMGKRVN
YAARTVITPDPNINVDEIGIPDIFAKKLSYPVPVTEWNVTELRKMVMNGPDVHPGANYIQ
DKNGFTTYIPADNASKRESLAKLLLSNPKDGIKIVHRHVLNGDVLLLNRQPSLHKPSIMG
HKARILHGEKTFRLHYSNCKAYNADFDGDEMNAHYPQSEVARAEAYNLVNVASNYLVPKD
GTPLGGLIQDHVISGVKLSIRGRFFNREDYQQLVFQGLSQLKKDIKLLPPTILKPAVLWS
GKQILSTIIINIIPEGYERINLDSFAKIAGKNWNVSRPRPAICGTNPEGNELSESQVQIR
NGELLVGVLDKQQYGATTYGLIHCMYELYGGDVSTLLLTAFTKVFTFFLQLEGFTLGVKD
ILVTDVADRKRRKIIRECRNVGNSAVAAALELEDEPPHDELVEKMEAAYVKDSKFRVLLD
RKYKSVLDSYTNDINSTCLPRGLITKFPSNNLQLMVLSGAKGSMVNTMQISCLLGQIELE
GKRPPLMISGKSLPSFTSFETSPKSGGFIDGRFMTGIQPQDFFFHCMAGREGLIDTAVKT
SRSGYLQRCLIKHLEGLSVHYDLTVRDSDNSVVQFLYGEDGLDILKSKFFNDKFCADFLT
QNATAILRPTHLQLMKDEEQLAKVQRHEKHIRSWQKKKPAKLRAAFTHFSEELREEVEVK
RPNEINSKTGRRRFDEGLLKLWKKADAEDKALYRKKYARCPDPAVAVYKQDLYYGSVSER
TSKLITDYAKRKPALKETIADIMRVKTIKSLAAPGEPVGLIAAQSIGEPSTQMTLNTFHF
AGRGEMNVTLGIPRLREILMLASSNIKTPSMDIPIKPGQQHQAEKLRINLNSVTLANLLE
YVNVSTGLTLDPERSYEYDMRFQFLPREVYKEDYGVRPKHIIKYMHQTFFKQLIRAILKV
SNASKTTKIVVIDDKKDAEKDEDNDLDNADEVGRSKGKANDDDSSDDNDDDDATGVKLKQ
RKTDEKDYDDPDDVEELHDANDDDDEAEDEDDEEKGQDGNDNDGDDKAVERLLSNDMVKG
YSYDKENHLWCQVKLNLSVRYQKPDLTSIIRELAGKSVVHQVQHIKRAIIYKGTDDEQLL
KTDGINIGEMFQHNKILDLNRLYSNDIHAIARTYGIEAASQVIVKEVSNVFKVYGITVDR
RHLSLIADYMTFDGTFQPLSRKGMEHSSSPLQQMSFESSLQFLKSAAGFGRSDELSSPSS
RLMVGLPVRNGTGAFELLTKIC
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgaaacgcgcgatggacgtgcacatgttcccctcggacctggaattcgccgtg
ttcacggaccaggagatccgcaaactgagcgtggtaaaggtgataactggcatcacgttc
gatgcactgggacacgcgatacccggtggtctatacgacatccgaatgggctcctacggc
cgatgcatggatccctgtgggacgtgtcttaagttgcaggactgtccgggccatatgggc
cacatagagctaggcacgcccgtctacaatcccttcttcattaagttcgtgcagcgactt
ctctgcatattctgtttgcactgctacaagctccagatgaaggatcacgaacgtgagata
attatgttacagctgcgcctaatcgacgcgggctacatcatcgaagcgcaggagttggaa
ctctttaaatcagaaactgtgtgccaaaacaccgacaatctggtggccatcaaaaacggc
gatatggtgcacccacacattgctgccatgtatagtctgctggaaaagaatgagaagaac
tccagcaactccactaagacgagttgctcactgcgcacggccattacgcattcggcactg
cagcgactgggcaagaagtgcaggcactgtaacaagtctatgcgtttcgtgcgttatatg
catcgtaggctggtattctacgtgaccttggcagatattaaagaacgcgttggcacgggc
gcagaagccggtggtcagaataaagttatcttcgctgacgaatgccgtcgttatctgcgc
cagatatacgcaaattaccctgaactattaaagctgctagtgcctgtcttagggctaagc
aacacggaattcactcagggcgatcgttcgccggtggatctgttcttcatggacacgctt
ccggtgacgccgccgcgcgctcgaccactgaacatggtcggtgacatgctaaagggaaat
ccccaaacggacatctacattaacatcattgaaaacaaccatgtattgaatgtggtactg
aagtacatgaagggcggccaggagaagctcacagaagaggctaaggccgcctatcaaaca
ctaaagggtgaaacagcccatgagaaattgtatgcggcttggttggctcttcaaatgtca
gtggatgtgctcctcgatgtgaatatgtcccgagaaatgaaatctggtgaaggtctgaag
caaatcattgaaaagaagagtggtctcattcgaagccatatgatgggcaaacgtgttaac
tacgccgctcggactgtcattacgccggatcccaatataaatgtggatgagattggcatt
cctgatattttcgcgaagaagctgtcgtaccccgtgcccgtgaccgaatggaatgttaca
gagctgcgcaaaatggttatgaacggtccggacgtgcatcccggggcgaattatatacag
gacaagaacggattcaccacatatataccggcggacaacgcctccaagcgtgagagtttg
gccaagctacttttgtcgaatcccaaggatggcattaagatcgttcatcggcatgttctc
aatggcgacgtcctactgcttaaccgacagccttcgctgcataagccatcgattatgggt
cacaaggctcgcattttgcatggtgagaaaacttttcgtctgcactactcaaactgcaag
gcgtacaacgccgatttcgatggtgatgaaatgaatgcccactatccgcagagtgaggtg
gcgagggcggaggcttacaacctagtaaatgtggccagcaactatttggtgcccaaggac
ggcacaccgttgggtggtctcattcaggatcacgtgatttcgggtgtaaagctgtcgatt
cgtggacgattcttcaatcgcgaagactaccagcaattggtgttccagggactatctcaa
cttaaaaaggatatcaagctgctgccaccgactattttaaagccagctgtgctttggtct
ggaaagcagatcttgtccaccattatcatcaacataattcccgagggatacgaaagaatt
aatctggattcatttgccaagattgctggaaagaattggaacgtgtcccgtccacgaccg
gccatttgtggtacaaatccagaaggaaacgagctaagcgaaagccaagtgcaaataaga
aacggagaactgcttgttggtgttctggataaacagcagtatggggccaccacgtatgga
ttgattcactgcatgtatgagctatacggcggcgatgtgtcaactctgctgcttaccgct
ttcacgaaagtatttaccttcttcctgcaactagaaggttttactttgggtgtcaaagat
attctggttaccgacgtagcagatcgtaagagaaggaagattattcgcgagtgtcgcaat
gtgggaaacagtgcagtagctgctgctctagaattggaagatgagccgccgcacgatgag
ctggttgagaaaatggaagcggcatatgtaaaggattcgaagttccgagtgcttttggat
cgtaaatacaaatcagtcttggatagctacacaaatgacattaatagtacttgtctgccc
agaggactgattaccaagtttccatcaaacaatctgcaattgatggttttatctggtgcc
aagggatccatggtgaacacaatgcaaatctcctgtctgctcggacaaattgagttagaa
ggaaagcgaccgcctttgatgatatccggcaagtctctacccagctttacttccttcgaa
acctcgcccaagtctggaggttttatcgatggacgttttatgaccggcattcagccgcag
gacttcttcttccattgcatggctggtcgtgaaggtctcattgatactgctgtaaaaaca
tcgcgttccggttatcttcagcgctgtcttattaaacatctggagggcctaagtgttcat
tatgatctcactgtacgcgatagtgacaatagtgtggttcagttcctatatggcgaggat
ggcttagacattctaaagtccaagtttttcaacgataagttctgcgctgacttccttaca
cagaacgccacggcaattctacgccctactcatcttcaattgatgaaggatgaggaacag
ctagccaaggtccagcgccacgaaaagcatatccgcagctggcagaagaaaaagccagct
aagctacgtgccgccttcactcatttctccgaggagctccgcgaggaggtggaggtgaag
cgacccaatgagattaatagcaaaacaggtcgtcggcgctttgatgagggcctcctaaaa
ttatggaaaaaggccgatgcagaggacaaggctttataccgcaagaagtacgcccgttgt
ccagatcccgcggtagctgtatacaagcaggatctttactatggcagtgtgtcagaaaga
acgagcaaactcattaccgattatgccaagaggaagccagcactgaaggagactatagcc
gatattatgcgagttaagacaattaagtcgttagcggctccaggtgaaccagtaggtctg
atagcagcccaatcgataggagaaccctcgactcagatgacattgaacactttccatttt
gcgggtcgtggtgagatgaacgtgactctgggtattcctcgactccgagaaatcctcatg
ctggcctcatcaaacatcaaaacgccgtctatggatatacccataaagcctggtcagcaa
catcaggcggaaaagctgcgcataaatctgaattcagtgacgttggcaaaccttttggaa
tacgtcaacgttagcactggtttgactctggacccggagcgatcctatgagtatgatatg
cgcttccaattcctgcccagagaggtctataaggaggactatggtgtgcgacccaaacat
ataatcaaatatatgcaccagaccttttttaaacaactgattcgcgccatcttgaaggtt
tccaatgcatctaagacaacgaaaatagttgtaatagacgacaaaaaggacgctgaaaaa
gatgaggataacgatttggacaacgccgatgaagtgggccgttctaagggcaaggctaat
gatgatgattcatcagacgataacgacgatgacgatgcaactggagtaaagcttaagcaa
cgcaaaacagatgagaaggactacgacgacccagatgacgtcgaggaactccatgatgct
aatgacgatgacgacgaggcggaggatgaggacgacgaggaaaagggtcaggatggtaat
gataatgatggcgatgacaaagcggtggagaggttgctgagcaacgatatggtcaaaggg
tactcctacgacaaggagaatcatttgtggtgccaggtcaagttgaatctgagtgtgcgg
taccagaagcccgatcttacctccatcatccgggagttggcgggcaagagtgtggtccac
caggtgcagcacatcaagcgggccattatctacaagggcaccgatgatgaacagctcctc
aagaccgacggcatcaacattggcgagatgttccagcacaacaagattcttgatctgaac
cgcctttattccaacgacatccacgcgattgccaggacgtacggcatcgaagcagcgtct
caagtgatcgttaaggaagtgagcaatgtgttcaaggtctatggaattactgtggatcgc
cgccacctgtcgctcattgccgattacatgaccttcgacggcaccttccagccgttgtcg
cgcaagggcatggagcactcctcgtcgcccctgcagcagatgtccttcgagtccagcttg
cagttcctcaagagcgccgctggattcggcagatcggatgagcttagctcgccgtcgagt
cggttgatggttggactcccggttcggaatggtactggtgcctttgagttgctgacgaaa
atttgttaa
DBGET
integrated database retrieval system
