Drosophila sechellia: 6609270
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Entry
6609270 CDS
T01064
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
dse
Drosophila sechellia
Pathway
dse03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
6609270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dse03400
]
6609270
DNA repair and recombination proteins [BR:
dse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
6609270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
6609270
NCBI-ProteinID:
XP_032570141
LinkDB
All DBs
Position
2R:11385064..11391404
Genome browser
AA seq
1298 aa
AA seq
DB search
MSDEEEDSVSEGFSASEDEWKPSKDVKGGESSDDDDSDFDELQAEGGAAGSSGRSSAVAG
KRGSDHKPPSGIKGSSVKKRKPTGQSLRSKLYNKYRPPPKTFPTSPSQQQENTPRASGSK
NAKTPNESGARNQHDPADSSSESSVEDYLVNPADLDLHSTFFAGGQKEKSPAPQFDCNAG
ITNLSDSGSEDNNESSFEDKAGNAFDFRGLLENANSLERTRDALSKRNVTATPPRSQAAT
MDVNALLALGENQNYQSVEVEEREGNQRKKAGRGAPAAPPTLDEPSRLSKTKSTRIKRHT
KTRPVSTVVANAGDTDDSDFEEVADADLSSDQDDGETPNISGDLEIRVGLEGLRPTKEQK
TQHELEMALKRRLNRDIKDRQILLHKVSLMCQIARSLKYNRLLSESDALMQATLKLLPSR
NAYPTERGTELKYLQSFVTWFKTSIKLLSPNLYSAQSPATKEAILEALLEQVKRKEARCK
QDMIFIFIALARGMGMHCRLIVNLQPMPLRPAASDLIPIKLRPDDKNKSQTVESEGESED
EKTKKDKKARKPADSKHEKESSKSTISKEAEKKNNAKKAETKPVSKSTTKGSDTTKSGTV
PKDKKEQSLSSKLVEKSKHQKAHTSSKSDTSFEEKPSTSSSSKCLKEEYSELGLTKKLLK
PTLSSKLVVKSKHQSSFSSNKSDTSFEENPSTSSSSKSLKEETAKLSSSKLKDKKVLSPA
ETKTKVQSSLLKRITTQNISESGDSKKSKMAPVDTFSPVAGRTRRAAVKPKTEEKPQVVG
SPVIPKLMLSKVKQLNAKHSDTENASPVDKHLQEQRNTRETRSRSKSPKVLISPSFLKKK
PHGADSTSAPQKHQMAPKSKARISPNFLSEALPARQLRSRGQKASSLAIPQLDGGDDVPL
PRKRPRLEKLKNSQDSDEVFEPAKPVKKAPVLPKSVQNLRKDRRVMSTDDEGGSRLNRKT
DASDMWVEVWSDVEEQWICVDLFKGKLHCVDTIRKNATPGLAYVFAFQDDQSLKDVTARY
CASWSTTVRKARVEKVWLDETIAPYLGHRTKRDITEDDQLRRIHSDKPLPKSISDFKDHP
LYVLERHLLKFQGLYPPDAPTLGFIRGEAVYSRDCVHLLHSREIWLKSARVVKLGEQPYK
VVKARPKWDKLTRTVIKDQPLEIFGYWQTQEYEPPTAENGIVPRNAYGNVELFKDCMLPK
KTVHLRLPGLIRICKKLNIDCANAVVGFDFHQGACHPMYDGFIVCEEFREVVTAAWEEDQ
QVQVLKEQEKYETRVYGNWKKLIKGLLIRERLKKKYNF
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgaggaggaggattccgtgtccgagggcttctcggccagcgaggatgaatgg
aagccgagcaaggacgtcaagggaggcgagtcctccgacgatgatgacagcgatttcgat
gagctgcaggcggagggaggagcagcgggctccagtgggcgatcctccgctgtagcgggc
aaaagaggcagcgatcacaagccaccaagtggcatcaagggctcttcggtgaagaaacgc
aagcccactggtcaatcacttcgctccaagctgtacaataagtaccgaccgcctccaaag
acctttcccacttctccttcgcaacagcaggagaacactccgcgggcttcgggttcaaaa
aacgccaaaacgcccaatgaaagcggtgcacggaatcagcacgatcctgctgattccagc
agcgaatccagtgtggaagactacctagttaatccagccgatcttgatctgcactcaacc
ttctttgccggcggccaaaaagagaagtcaccggcgccgcaattcgattgtaatgcgggc
attacgaatctttcagactccggatcagaggataacaacgagagcagcttcgaggataaa
gcaggcaatgccttcgactttcgcggtctcctggagaacgcaaacagtttggagcgcact
agggatgctttaagcaaacgaaatgtcacggccactccgccaaggagccaggctgccaca
atggatgtcaatgcgctgcttgcattgggcgagaaccaaaactaccagagtgtggaggtt
gaggaacgtgaaggaaatcaacgtaagaaggcgggaagaggagcaccagcagcgcctccg
acactcgatgaaccgtcacgcctcagcaagacgaagtcgacgcgaataaagcggcacacc
aagacgcgacccgtgtccactgtggtcgccaacgctggtgatactgatgactccgatttt
gaggaagtggcagatgcagatctatccagtgaccaggacgatggcgagacgccgaacatc
tcaggggatttggagatccgcgtgggactggaaggcctccgtcctacgaaggagcaaaag
actcaacacgaactggagatggccctaaagcgtcgccttaacagggacatcaaggaccgt
cagattttgctgcacaaagtcagcctgatgtgccaaatagctcgcagcttaaagtacaat
cgcctgctgagcgagtcagatgcattgatgcaggctacactaaaactcttgccaagccga
aacgcatatcctactgaacgaggaaccgaacttaaatatctgcagtcgtttgtcacgtgg
ttcaaaacatcaatcaaactgctaagtcccaatttatattccgcgcagtcgcctgctacg
aaggaagccatattagaggctttactggagcaggtgaagcgcaaggaagcccgctgcaag
caggatatgattttcatattcattgcccttgcacggggaatggggatgcactgtcggcta
attgtcaatctccagccaatgccgctacgtccggcggccagtgatctgattcccattaaa
cttaggccagatgataagaacaaaagccaaacagtggaatccgaaggggaaagtgaggat
gagaagactaaaaaagataagaaggcaaggaagccagcagactcaaagcatgaaaaagaa
agcagtaagtcaactatttccaaagaggctgaaaagaaaaacaatgcaaaaaaagctgag
actaaaccagtcagtaaatcaacaaccaagggctcagacaccacgaaatcaggtacagtt
ccgaaggataaaaaggagcaaagtctgtcctcaaaattggttgaaaaatcaaaacatcaa
aaagcccatacctccagcaaatctgacacttcctttgaggagaaaccaagtacgtcgtcc
agctctaaatgtctaaaagaagaatattcagaactgggattaaccaaaaagttattgaaa
ccgactctatcctcaaaattggttgtaaaatcaaaacatcaatcttcatttagctccaat
aaatcggatacttcttttgaggagaatccaagtacctcatcaagttccaaatctttaaaa
gaagagacagccaagttaagttcatccaaactcaaagacaaaaaggtcttaagccctgca
gaaaccaaaactaaagtacagtcgtccctgctaaaaaggatcaccactcaaaatatttct
gaatcaggcgatagcaagaaatcgaaaatggctcctgtggacacattctccccagtggca
ggtcgcacacgtagagccgctgtgaaaccaaaaacagaggagaaaccgcaggtggttgga
tcaccagtaatacctaaactgatgctgtccaaagtaaagcagctaaatgccaagcatagt
gatacggaaaacgctagtcctgtggataagcatttgcaggaacagcgcaacacaagggaa
actcgatcgaggagcaagtccccgaaagtacttatatctcctagtttccttaaaaagaaa
ccccacggagccgattccacttcagcccctcaaaagcatcaaatggcgccgaaaagtaag
gcgcgaatttctccaaactttctgtccgaagctttaccagctcgccagctacgaagccga
ggtcaaaaagccagtagtctagccattccgcaattagatggcggtgacgatgtgccgcta
ccgagaaagcgcccaagactggagaagttgaaaaattcgcaagattccgatgaggtgttt
gaacccgccaagccggtgaaaaaggctcctgtactgcccaagtcagtacagaatctgcga
aaagatcgacgagtgatgtccacagatgatgagggcggttccaggctcaatcggaaaacg
gacgcctctgacatgtgggtggaagtgtggtcagatgtggaggagcagtggatctgtgta
gatctattcaaaggcaagctgcactgcgtggacacaataaggaaaaatgcaacgcctgga
ttagcctacgtatttgcctttcaggacgatcagagtttaaaggatgtgaccgccaggtac
tgtgccagttggagcaccactgtgcgcaaggcccgtgtggaaaaggtgtggctagatgaa
actattgctccttacctcggacaccgcaccaagcgcgatataacagaggatgatcaactt
cgtcgcattcactccgataaacccttgccaaagtccatttccgatttcaaggaccatccg
ctgtacgtgctggagcggcacttgcttaagttccagggtctatatccaccagatgcgcct
acattgggctttatccgaggtgaagcggtgtactccagagattgtgtgcacctcctgcat
tctcgggaaatctggctaaaaagcgcacgcgtagtgaagcttggcgaacagccgtacaag
gtggttaaggcacgtccaaagtgggataagctcacgcgcactgtcatcaaggaccagcca
ctggaaatattcgggtattggcagactcaggaatacgagcccccaactgcagagaatgga
attgtgccgcgaaatgcctacggcaatgttgaactctttaaggactgcatgctgccaaag
aagacggtgcacttgagattgcccggcttgatccgcatctgtaagaagctgaatattgat
tgtgccaatgcagtggtaggcttcgatttccatcagggggcttgtcatcccatgtacgat
ggcttcattgtttgcgaggaattccgcgaagtggtcactgctgcctgggaagaggatcaa
caggtgcaagttctcaaggagcaggagaagtacgaaacccgcgtgtatggaaactggaag
aaactgatcaagggtctcctcattcgcgagcgactcaagaaaaaatataacttttga
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