Drosophila sechellia: 6610298
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Entry
6610298 CDS
T01064
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
dse
Drosophila sechellia
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dse03021
]
6610298
Transcription machinery [BR:
dse03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
6610298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_14
TPR_1
TPR_8
TPR_12
TPR_CcmH_CycH
TPR_17
TPR_16
TPR_6
TPR_7
TPR_11
ARM_TT21_4th
TPR_Slam
ANAPC3
DUF7017
TPR_MalT
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
6610298
NCBI-ProteinID:
XP_002034893
UniProt:
B4HVR4
LinkDB
All DBs
Position
3L:1342898..1347202
Genome browser
AA seq
1152 aa
AA seq
DB search
MSNCIEIPLQDTDEVIEVDPDQLPDCPEVLSILKQERAPLHVWVNVALAYYKQKKTEDFV
TLLEESRNDDATKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKRELFMKATNLYTSA
DKIIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGKACIAFNRKDYR
GAMAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERALQLDQQCVGALIGLAV
LKLNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTE
NEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENA
AQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQ
ILEQNDLQASLSAYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKMAKRTLESALKH
ATSEMDKDVKYYESIQVTMKYNLARLNEAMSSYDVADKLYKEILKEHPNYIDCYLRLGCM
ARDKGLIFVASDFFKDALNINNDNPDARSLLGNLHLAKMQFALGQKNFETILKNPSTSTD
AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHK
GCVIEARDIFAQVREATADFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVM
QYLARAYLRANKLVDAKAVLLKARRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEIVL
QAVHELELAQKYFQYLSVHGDKNRFNIEVAGIEASTCQDLLSQAQYHVGRARRIDEEERS
LRRKQEEEREAFKIKVAEQRKRREEEAKTSRDQLLAKRQEYVEKTKNMLIIADAPPEKER
KKGGGRGRKDDYISGTESENDGARREGERPSKKKGKGERKKGGGRKRKTEKYESDSEEEP
GASGKSGKKKGKKPKPVKESKEKLSAKQRLKVLSKETISTSESESDGKRSKSRSRSRSRS
RNRSGSRSGSVSRSGSDREAGRKRSRSRSGSGSGSDSDEATKRKRAKNRIESGGESDRSG
SRARSKSSSRSRSRSKSGSRSRSRSKSGSRSRSRSKSGSRSRSRSPSGSRSRSRSGSRSK
SEYRSRSGSPEK
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgtccaactgcatagagatccctctgcaggacaccgatgaggtgatcgaggtggacccg
gatcaactgcccgactgtccagaggtgttgagcattctcaagcaggagcgggcgcccctc
cacgtttgggtcaatgtggcgcttgcctactacaagcaaaagaagacggaggactttgtc
acgctgctggaggagtcgcgcaacgatgatgccaccaaggagtaccgcgactcagacaag
gacctcatgcgcgccctggacatgctcgctgcccactatgtccaggaggcgtatcgggag
aagtccaaggacaagaaacgagagcttttcatgaaggccaccaacctgtacaccagtgcc
gacaagattatcatgtacgaccagagccatctgctgggcagggcctacttctgtctgctg
gagggcgacaagatggaccaggcggatgcccagttcaactttgtgcttaaccagtccccc
tcgaatattccctccctgctgggaaaggcctgcatcgcgttcaatcgcaaggattatcgc
ggagcgatggccttctacaagaaggccttgcgtacaaatccaaactgtcctgcgaacgtg
agaatcggtatggcccattgcttcctgaagatgggcaatcccgagaaggccaagctagcc
tttgaacgagcgctccagctggatcagcagtgtgtgggcgctttgattggcctggccgtt
ctcaagctgaaccaacttgagcccgagtccaacaaactgggtgtccagatgctctccaag
gcgtacaccatagacaatgccaatcccatggtgctcaatcacctggccaatcacttcttc
ttcaagaaggactatcagaaagtccaccacctggcgctgcacgccttccacaacactgag
aacgaggcgatgcgagccgagagctgttatcagctggccaggagtttccatgcccagagc
gactacgatcaggcctttcagtactattaccaatccactcagattgcgccagctaacttc
gtgctgccccattacggactaggccagatgtatatatatcgaggagatacagaaaatgcc
gctcagtgtttcgagaaagtgctgaaaattcagccaggcaactacgagaccatgaagatt
ctgggatccctgtacgcacactccaattcgcaaaccaagcgtgacatggccaagactcac
ctcaagaaggtcaccgaacaatttcctgaggacattgaagcctggatagaactggctcag
atcctggagcagaacgacctgcaggcctcgctcagtgcttacggcacagcctctagtatt
cttcgcgacaaagccaagtacgagatacccgctgagattcaaaacaacgtggcttcactg
cactaccgcctgggcaacctgaagatggcaaagcgcaccttggagtcggccctgaagcat
gcaacctctgagatggacaaggatgttaaatactacgagtccattcaggtcaccatgaag
tacaatctggcccgtcttaacgaggcaatgagtagctacgatgtggccgacaaactgtac
aaggagatcctcaaggagcatcccaactacatcgactgctacttacggctgggttgcatg
gcaagggacaagggtctcattttcgtggcttccgatttcttcaaggacgcgctgaacatt
aacaacgacaatccagatgcgagatcactgctgggaaatctccatttggccaaaatgcaa
ttcgctttgggacagaagaacttcgaaacgatcctcaagaatccgtctacttccacggac
gcctactcactgattgctctgggaaacttttcgttgcaaacactgcatcagccgagtagg
gataaggagaaggagaggaagcaccaggagaaggctttggccatatttaaacaggttctt
cgcaatgatccccgaaatatttgggccaccaatggaataggtgccgtgctggcacataaa
ggatgcgtgatcgaggcgcgcgatatcttcgcccaggtgcgcgaagccaccgccgacttc
tgcgacgtgtggctgaatattgcgcacgtttatgtcgagcagaagcagtacatcagcgcc
attcagatgtatgaaaactgcatgaagaagttctacaagcacaacaacgtcgaggtgatg
caatatctggcaagagcatatctgcgagccaacaagcttgtcgatgccaaggcagtgcta
cttaaggcccgtcgggttgccccccaggacacagttctactcttcaacatagcagtggtc
ctctcacgtttggccatggccatactcaaggatgagaaatctactctggaaattgttctg
caggctgtccacgaactggagctggctcaaaaatacttccaatatctgtctgtgcacggg
gataagaatcgcttcaacattgaggtggctggcattgaggcaagcacctgccaggatctt
ctctctcaggcccagtaccatgtgggccgtgcacgtcgcattgacgaggaggagcgctcg
ttgcgccggaaacaggaagaggagcgcgaggccttcaaaattaaggtggcggagcagcgc
aagcggcgggaggaggaggcaaagacttccagggaccagttgctagccaagcggcaggag
tacgtggagaagaccaagaacatgctcatcattgcggacgctccacctgaaaaggaacgc
aagaagggtggtgggcgaggtcgtaaggatgactacatctccggtaccgaaagcgaaaac
gatggagctcgtcgtgagggagaacgtccctcgaagaagaagggcaagggggaacgcaaa
aagggcggcggtcgcaagcgcaaaacggagaagtacgagagcgacagcgaggaagagcca
ggtgccagtggcaagtcgggaaagaagaagggcaagaagccgaagccggttaaagagtcc
aaggaaaaactttccgccaagcagcgcctcaaggtactctccaaggagacgatctccacc
agcgaatccgagtctgacggtaagcgcagcaagagcagaagtagaagcagaagcaggagt
cgaaatcgcagtggtagccggagtggcagtgtatctaggagcggcagtgatcgcgaggct
ggccgcaagcgcagcaggagcagaagtggatctggatctgggagtgacagtgatgaagca
actaagcggaagcgcgccaagaatcgcatcgaatccggcggggaatcggatagatctggg
tcccgtgctcgctccaagtcgagttcccgttcaagatctcgctccaagtccggatctcga
tcgaggtcccgctccaagtcgggatcccgttcgagatcgcgctcaaagtccggctcccgc
tcgagatcccgctcgccgtcgggttcaagatcccgctctcgttctggcagccgatccaag
tccgaataccgcagcagatcagggtctccggaaaaataa
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integrated database retrieval system
