Drosophila sechellia: 6610416
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Entry
6610416 CDS
T01064
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
dse
Drosophila sechellia
Pathway
dse03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6610416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dse03019
]
6610416
Messenger RNA biogenesis [BR:
dse03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
6610416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
6610416
NCBI-ProteinID:
XP_002034998
UniProt:
B4HW19
LinkDB
All DBs
Position
3L:complement(1879913..1882156)
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AA seq
670 aa
AA seq
DB search
MSRHRIVRTMDYNDEYDGYDDIYGHSVEDEHCISPTDAQQWLYDRARGQQSISAFISKNK
DIQEEEYDEDEDEDAAFAKARRDSESFQMPQLDEIEQAKLSSCVDEVRSVVGDAVSERRI
VETSMKFDYDMQKILDEILNEETKKSAKPAVNKMKAPAAPVLPKMVSKTVPTPPPKISLK
EPRRGFEIPSPKVPSSPVVSGRNTPVDISAGDDISRSSASVFKVSKEQAVRNARQLYEKE
RADQKSHIHMIVIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQESKKLGKQSFMYAWVL
DETGEERARGITMDVGQSRIETKTKIVTLLDAPGHKDFIPNMISGATQADVALLVVDATR
GEFESGFELGGQTREHAILVRSLGVNQLGVVINKLDTVGWSQDRFTEIVTKLKSFLKLAG
FKESDVSFTPCSGLTGENLTKKAQEPALTSWYSGRHLLDVIENFKIPERAIDRPLRMSVS
DIYKGTGSGFCISGRVETGVLCLNDKVLVGASREQAQVKSLTMDEFPQTCVFAGDQVSIT
LPALDINNVTVGCIISDPQTPIPVTTRFQARIIVFNVKVPITMGFPVLLHHQSLIEPAVV
CKLTASIHKSTGEVVKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAGVT
IAAGMVTKIR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcacaggatagtgcgcaccatggactacaacgatgagtacgatggctacgac
gacatctatgggcactccgtggaggacgagcactgcatctcgcccacggatgcccagcaa
tggctctacgatcgagctcgtggccagcagagcatctcggcgttcatcagcaagaacaag
gacatccaagaggaggagtacgacgaggatgaggacgaggacgccgccttcgcgaaggct
cgtcgcgactccgagagcttccagatgccgcaactagacgaaatcgagcaggccaagctg
agctcctgcgtggacgaggtgcggagcgtggtaggcgatgccgtctccgagcgccgtatc
gtggagacatccatgaaattcgactacgacatgcagaagatcctggacgagatcctcaac
gaagagaccaagaagtctgccaagccagctgtgaataagatgaaagcgcccgccgcgcca
gtgctgcccaagatggtcagcaaaacggtgcctacgccaccacccaagatcagccttaag
gagccgcgccggggcttcgaaataccctcacccaaggtgccctcgtcgcctgtggtctcg
ggccgaaacacacccgttgacatcagcgccggcgacgacatctcccgtagctcagcatcc
gtttttaaggtctccaaggaacaggccgtgcgcaatgcccgccagctgtacgagaaggag
cgagccgaccagaagagccacattcacatgatcgttattggtcacgtcgacgccgggaag
agcacactgatgggccatctactgtacgacacaggcaacgtttcccaacgcgtgatgcac
aagcacgagcaggagtccaagaagctgggcaagcagagcttcatgtacgcctgggtgctg
gacgagacgggcgaggagcgggcccgcggcatcaccatggacgtgggccagtcgcgtatc
gaaaccaagaccaagatcgtcacactgctggatgctccggggcacaaggacttcattccg
aacatgatctccggtgccacacaggcggatgttgcccttctggtggtggatgctacaagg
ggagagtttgaatccggctttgagctcggcggacagactagagagcacgccatcctagtg
cgatccctgggggttaaccaactaggcgtggtcatcaacaagctggacaccgttggctgg
tcccaggaccgattcacagagattgtgactaagctaaagtccttcctcaaactggcgggc
ttcaaggagtccgatgtgagttttacgccctgttccggactaactggcgagaacctcacc
aagaaagcccaggaacccgccctgactagctggtacagtggacgccatctgctggatgtc
atcgagaacttcaagatccccgaaagagccattgatagaccgctgcggatgtccgtgtcg
gacatttacaagggcactggctccggattctgcatctcgggacgagtggaaaccggagtg
ctgtgtctgaacgacaaggtgctggttggtgccagccgggagcaggcgcaagtgaaatcc
ctcaccatggacgaatttccacagacttgcgtgttcgccggcgaccaggtctctattacc
ctgcccgccttggacatcaacaacgtcactgtgggctgcatcatcagcgatccacagacc
cccattcctgtgacaacgcgattccaggcccgcattatcgtgttcaacgtcaaggtgccc
attaccatgggcttccccgtgctgctgcaccaccaatccctgatagagcccgccgtggtc
tgcaagctaaccgcatcgattcacaaaagcaccggcgaggtggtcaagaagaagccgcgt
tgcctgggcaacaactcgtgtgccctggtggaactggaaaccagcagacccatctgcatc
gagcggtatgcggacttcaaggagttgggacgcgtgatgctgcgggtggcgggagtcacc
attgccgccggaatggtcaccaagatccgctag
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