Drosophila sechellia: 6610550
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Entry
6610550 CDS
T01064
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
dse
Drosophila sechellia
Pathway
dse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6610550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dse03019
]
6610550
Messenger RNA biogenesis [BR:
dse03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
6610550
mRNA degradation factors
3'-5' decay
Pan complex
6610550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
DUF4797
Pkinase
Motif
Other DBs
NCBI-GeneID:
6610550
NCBI-ProteinID:
XP_032575883
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All DBs
Position
3L:3051879..3069345
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AA seq
785 aa
AA seq
DB search
MSTFLNNFFPADTAAMDPIFFSPTNGIPSESKLATYMNRQNVATPSGYGLNNGFSLLNLD
SPLNKKSQVTPQSPEFIPTRLSSTPNFYAPYHNAPMQLSNGLNGVNGLTAAAAAAAAAAA
AAVPSSTSSASSASVTISKTANGGASMLALQKTSSIASVTIAQQQPQHPQKQQQHPPSVG
GGAVSAASAPIAISGAPPNPAAAPFVSSMSAQTPLKGRGAMMRQESPTAAMISGAGPGEK
SPPHGMTPHGASPIPSALPTSVHQENVGGTIYFYPTANAQNSQPVVNSMVVDGTHPALHG
VSAVAPMSAGVPAAMMYTGHVYPGPSSNVVTMQPKTLLESAFFMPDEMRTEVLARNEISN
LIMDAAEAAQHALPLEVENYHALYPLEPPAQPLHAKLTFPATTYRATHNTTGYKYCLRRI
HGFRLQSTKCMTLVEMWKKLQHTNVVQLREVFTTKAFGDNSLVLVYDYHPGSQTLLAKYF
TPAPETNGYTDPFQGEARPFSHKSNMQRTSNGPLLPEATIWSIIMQLTAGLKAIHHAGLA
CKVLDPTKIIVTGKRVRFSSCCISDITQFDPNASNPLALVNMHQQDDLTALGRLVLALAC
RCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLFTTNNRRSVTDLMPMIGARFYTQLDAL
QSKIDMQEDELAKEMENGRLYRILVKLNSINERPDFNLDCTWSETGDRYMLKLFRDYLFH
SVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMSRDEQSVLIVSYAELKNCLENAFSELM
SSAAN
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgttcttgaacaatttcttcccggcagatacggctgctatggatccaattttc
ttctcgccaacgaatggaataccgtcagagagtaaactcgccacttatatgaatcgacag
aatgtcgccacaccgagcggttatgggctgaataacgggttctcactacttaatttggat
tcgcccctaaataaaaagtcccaggtcacgccgcagtcgcccgagttcattccaacgcgc
cttagctcgacgcccaacttctacgcaccatatcacaacgcgcccatgcaattgagtaat
gggctcaatggcgtcaatgggttaacagccgccgcagcagcagcagcagccgccgccgcg
gcagcagttccctcctccacgtcatcggcatcctccgcctcggtgaccatcagcaaaacg
gccaacggcggcgcctccatgctcgccctgcaaaagacctcatccatcgcctctgtaacc
atcgcacaacagcagccacagcatccacagaaacagcaacagcatccgccgtcggtgggc
ggaggagctgtgtccgccgcctccgcccccattgccattagtggcgctccaccgaatccc
gccgcagctccgttcgtcagcagcatgtccgctcagacgccgctcaaggggaggggcgcc
atgatgcgccaggaatcaccgacagcagccatgatttcgggcgcaggaccaggtgagaag
tcgccaccgcacgggatgacgccgcacggagcatcgcccataccatcagcgctgcccacc
agcgtgcaccaggagaacgtaggcggcaccatatacttctatccgactgccaacgcacag
aacagccagcccgtcgtcaattccatggtggtggacggaacgcatccggctctccatggc
gtgagtgctgtggcgccgatgagtgcgggcgttccggcggccatgatgtacacggggcat
gtgtatccgggaccgtcctccaacgtggtcaccatgcagccaaagacgctgctggagtcg
gccttctttatgcccgacgagatgcgcaccgaagtccttgcccgcaacgagatctctaac
ctgatcatggacgcagcggaggctgcgcagcacgctctaccgctggaggtggagaactac
catgccctctatccactggaaccgccggcgcagccgttgcacgccaagctcacgttcccc
gccaccacttacagggccacgcacaacacgacgggctacaagtactgcctgcgaagaata
catggtttccgcctgcagtcgaccaagtgcatgacgctggtggagatgtggaagaagctg
cagcacacgaatgtggtacaactgcgtgaggtgttcacgacgaaagcatttggtgataac
tctttagtattagtgtacgactatcatcccggctcacaaacattgctggccaaatacttc
actccggcgccagagaccaacgggtacactgatccattccaaggcgaggcccgccccttc
agtcataagagtaacatgcagcgaacgagcaatggacctctgctaccggaggccaccatc
tggtcgatcataatgcagctgaccgccggcttaaaggccatccaccatgccggtcttgcc
tgcaaagttctggatcccacaaagatcatagtaacgggcaagcgtgtacggtttagctca
tgctgcatttcggatataacgcaattcgatccgaatgcatccaatcccttggccctggtt
aatatgcatcagcaggacgatctgaccgctttgggtcgcttagtattagctttggcctgc
cgctgccttcaatccgtgcaacgcgacaatgtccagtcgagcatcgatatggtcacgcga
aactactccaccgatctgcggaacttcattgtttacctcttcaccaccaacaaccgtcgc
tccgtgaccgacctgatgccaatgattggtgcccgcttctatacgcaactggatgcactg
cagagcaaaattgatatgcaggaggacgagttggccaaggagatggagaacgggcggtta
tatcgcattttggtcaaacttaacagcatcaacgagcgacccgattttaatctggactgc
acttggtccgagactggtgatagatacatgttgaaattattccgtgattatttgttccat
tccgtcactgaggatggccggccctggctagatcacgcacacattgtacaatgcctcaac
aagctggatgctggctccatagagcgcgtgcaactgatgtcccgcgacgagcaatcggta
ctcatcgtctcctatgctgaactcaagaattgtctggagaacgccttctccgaactgatg
tcaagtgcggccaactga
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