KEGG   Drosophila sechellia: 6610721
Entry
6610721           CDS       T01064                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
dse  Drosophila sechellia
Pathway
dse03030  DNA replication
dse03410  Base excision repair
dse03420  Nucleotide excision repair
dse03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    6610721
   03410 Base excision repair
    6610721
   03420 Nucleotide excision repair
    6610721
   03430 Mismatch repair
    6610721
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dse03032]
    6610721
   03036 Chromosome and associated proteins [BR:dse03036]
    6610721
   03400 DNA repair and recombination proteins [BR:dse03400]
    6610721
DNA replication proteins [BR:dse03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    6610721
  DNA Replication Termination Factors
   ELG1-RFC complex
    6610721
Chromosome and associated proteins [BR:dse03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    6610721
DNA repair and recombination proteins [BR:dse03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     6610721
  Check point factors
   HRAD17(Rad24)-RFC complex
    6610721
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 Mg_chelatase AAA_16 Viral_helicase1 Rad17 nSTAND3 AAA_18 AAA_19 MeaB AAA_24 AAA_5 RCF1-5-like_lid AAA_11 RuvB_N ABC_tran MnmE_helical RNA_helicase AAA_assoc_2 NTPase_1 DEAD AAA_2 AAA_23 AAA_28 AAA_30 AAA_7 AAA_3 MCM SRP54 AAA_29 IstB_IS21 AMP-binding_C_3 KTI12 FtsK_SpoIIIE AAA_33 bpMoxR DUF815 SNF2-rel_dom ATPase_2 cobW ATP_bind_1 CbiA
Other DBs
NCBI-GeneID: 6610721
NCBI-ProteinID: XP_002035287
UniProt: B4HU02
LinkDB
Position
3L:complement(4112558..4113816)
AA seq 331 aa
MPEEPEKSADYKRSHLPWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGV
GKTTTIQCLARILLGDSYKEAVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRHKIVIL
DEADSMTEGAQQALRRTMEIYSSTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLA
KLIEVAKWEKLNYTEDGLEAIVFTAQGDMRQGLNNLQSTAQGFGDITAENVFKVCDEPHP
KLLEEMIHHCAANDIHKAYKILAKLWKLGYSPEDIIANIFRVCKRINIDEHLKLDFIREI
GMTHMKIIDGINSLLQLTALLAKLCIVAEKH
NT seq 996 nt   +upstreamnt  +downstreamnt
atgccggaagaaccagagaaatcggcggactacaagcgcagtcacttgccctggattgaa
aagtaccgccccgtgaagttcaaggagatagtgggcaacgaggataccgtagcaagatta
tcagtattcgccacccagggaaatgcacccaatattattattgctggtcctccaggcgtg
ggcaagacaaccaccatccagtgtcttgctagaattcttctgggagacagctacaaggag
gctgtcctcgagctgaatgcctccaatgaacgaggaatcgatgtggtccgcaacaagatc
aagatgtttgctcagcaaaaggtgacattgccgcggggcaggcacaagattgtaattctg
gacgaggccgacagcatgacggagggtgcccagcaggcactgcgtcggaccatggagatc
tacagcagcaccactcgttttgccctggcctgcaacaccagcgagaagatcatagagcct
atccagtcccgctgcgccatgctacgattcaccaagctgtccgatgcgcaagttctggcc
aagctcatcgaggtggccaagtgggagaagctcaactacacggaggacggactggaggcc
atcgtgttcactgcccaaggtgacatgcgacagggactgaacaacctgcagtccaccgcc
cagggatttggcgacatcaccgctgagaacgtttttaaggtctgcgacgagccccacccg
aagctcctggaggagatgatccaccattgcgctgccaacgacatacacaaggcctacaaa
atcctggccaagttgtggaagctgggatactcgccggaagacatcattgcgaacatattc
cgggtctgcaagcgcatcaacatcgatgagcatctaaagctggactttatccgtgagatt
ggcatgacccacatgaagattatcgacggtatcaactcgctgctgcagctcaccgccctc
ctggccaaactctgcattgtcgcagagaagcattag

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