Drosophila sechellia: 6611027
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Entry
6611027 CDS
T01064
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
dse
Drosophila sechellia
Pathway
dse04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
6611027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dse04131
]
6611027
Membrane trafficking [BR:
dse04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
6611027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
Clathrin
TPR_Vps41
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_2
zf-RING_2
zf-RING_5
Beta-prop_EML_2
Vps39_1
zf_RING_Vps8
Beta-prop_HPS5
zf-C3HC4_3
zf-rbx1
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
PQQ_2
Prok-RING_1
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
6611027
NCBI-ProteinID:
XP_002035584
UniProt:
B4HUU9
LinkDB
All DBs
Position
3L:complement(6358617..6362706)
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AA seq
1229 aa
AA seq
DB search
MSELKAPSLQSLLESGRGSTDSLLAESLQLDFEDLDDAEFAIPPTDVLPTLEAVLSEFEA
DSDVASEFGMPVPHATPTPSIGEDSTIRTDGRGGGGSIMRYTLLHGISAQLSSAAERVNA
GAASSCAVAAFIAIGTSHGHILNFDVTQTLRWAHQDKHGQGAVASLAFNADSTRLLAGFS
RGLVAMLDTHTGDVLRELFDVITPNTGVLHVKWTSRSSLALCADAGGSVWSLSFTRKLGI
RGCQSRCLFSGARGEVCAVEPLIMDSQGRHELDQYCIVALATLSKYFIVTVRPRLRVIKY
HVLQGPPDCLPLLAWHLVLIQAADTSRSVDPVIVVGRGNQLFFHQLFVSNGRITLLYLRH
VQLQGSLLSAHWLGPKCVASLDTAEILHLVDVRSSKELECMDMANAGLVYGSAQFKGLAT
GGNVSPAFALAGSNACYNSVVSRGTQLYVLGARSLHIIGVRTWSERISFLVKHHRWQEAC
QLALDGYIASVDRPRKRAQAKERIIMLFKEYIANSARAPDYCLGAIVNCLITVGELDLLW
TQLWEKLHNSSTELFLQHISEHIEKERIHSVNPVISQALVDYWLEHSPAKLEQLILKLDW
MCLDLNQVLKAVKKHRLYRAQIYLNTQALNDYTAALTELLPLVTPEETDLGNCLLVYVSS
CLAGRGYPSGEIPVELVHQVKHDVLRCLTSQHSKENAGDELPYPYLRALLKFDTRETLNV
ISLAFQEREFSNELEISHRKRIINLLLEIMSPENATWAEIGCLLNFIAQQISMQCLPRDR
QLLERVLSHLAQEEIANESSRQHSERENAWHELLSSNCLAEISSDEEQLRLAEKAKCYCV
VEYLLEKLERYDTILDCYIRNEARHETMFAYMERHVASPKRSIYRQLKRHLRELLAINAK
ETTRLLALHYPEKIHELLDGLRREENLLFLFLKCLNDRKSALEASQMELLLELYCKMESA
STVEEFLRSNSGYRLEKAIAIAESHHLNRSVIYLYEKQESYAKAFELSMELLKSAAGEEA
AKEAQTISALLARSVETLPAQELERCWFALLQYILPHQELQSITKSLLHEASQHIDLHNL
VQLIMNTHNVSTSFGDIKDLLMGMLDSSRHKTEALRASAGALCQDLHLEFVKRYQHAHRG
LWVTTTKCSVCRQRLYDHSQVLIFGGCGHGIHEQCMEESETLFEECPRCFTAIPDQSIGL
PRPNKNLISISSSLEMGALQLKAPPRRFI
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagcttaaggccccgtcgctgcaatctctgctggaatcggggcgaggatccaca
gacagtctgctggccgaatccctgcagctggatttcgaagatcttgatgatgccgagttt
gcaataccgcccaccgatgtgctgcccactttggaggcggtgctcagtgaattcgaggcg
gattcggatgtggcctccgagtttggaatgccggtaccccatgccacgcccacgccctcg
attggcgaggattccacgataagaacagacggcagaggcggtggaggatccataatgagg
tacaccctcctacacggcatctcggcccaactttcctcagcggcggaacgtgtcaatgcc
ggagcagccagttcctgtgccgtggccgctttcatagccatcggaacatcgcatggacac
attttgaacttcgatgtaacccaaacccttaggtgggcccatcaggacaagcacggtcag
ggtgcggtggccagtctagccttcaatgcggattccacgcggcttttggccggtttctct
aggggattagttgccatgctggacactcatacgggtgatgttctccgtgagctgttcgac
gtcataacgccaaacaccggcgtactgcatgtcaaatggacctccagatcatcactggcc
ttatgtgccgatgccggcggatcggtgtggtctcttagtttcacacggaagctgggcatc
cgaggctgccaatcgagatgcctcttctccggcgctcgcggagaggtctgcgccgtggaa
cccctaataatggattcccaagggcgccatgaattggatcagtactgcatagtggctctg
gcaacgttatccaagtattttatcgtcactgtccgaccaagattgagggtcatcaaatac
cacgtgcttcagggacctcctgattgcttacctcttctcgcctggcatttagttctcatt
caagcggcagatacttcccgctccgtggaccccgtgatcgtcgtgggccgcgggaatcaa
ttattctttcaccaactgtttgtctcgaatggacggatcacgcttttatatcttcggcat
gtccagctgcaggggagtctcctctccgctcactggctgggaccaaagtgtgttgcctca
ttggacacggcggaaatacttcatctggtggatgtgcgatccagcaaggaactagaatgt
atggatatggccaatgcaggactggtctacggatcggcacagtttaaaggactagccact
ggcggaaatgtgtcacctgccttcgctttagccggctcaaatgcctgttataactcagtg
gtttcaagaggaacacaactgtacgttttgggcgccaggtccctgcatataattggagtt
agaacttggtcagagagaattagcttcctggtgaaacaccatcggtggcaggaagcctgc
caactggcactcgatggctacattgcctcggtggatcgcccaaggaaacgtgcccaagcc
aaggagcgcatcatcatgctctttaaggaatacatcgccaattccgcccgggcaccagac
tattgtctcggggccattgtcaactgcttgatcaccgtgggtgaactggatcttctgtgg
acacagctgtgggaaaagttgcacaacagcagcactgaacttttcttacagcacatttcc
gagcacatagaaaaggaaaggatacatagtgtcaatcccgtgatatcacaggcattggtg
gattactggctggaacactcccctgccaaacttgaacagcttatcctcaaactggattgg
atgtgcctggatcttaaccaggtacttaaggctgtgaagaagcaccgtctgtatagggct
caaatctacctcaacacccaagctttgaatgattatacggcggcgctaacggaactcctt
ccattggtaaccccagaggagaccgatttgggtaactgcctgttggtctacgtttccagt
tgtctggcgggaaggggctatcccagcggagaaattcccgtggagctggttcatcaagtc
aagcacgatgtcctgcgttgcctaacctcccaacactccaaggagaatgccggcgatgag
ctgccctatccgtatcttagagctctccttaagtttgatactcgggaaaccctaaacgtt
atatcgctggcgtttcaggaacgagagtttagcaacgagctggaaatctcgcatcgcaag
aggattatcaatctgctgctggaaatcatgtcgcccgagaatgcaacgtgggcggagatt
ggctgcctgctgaacttcattgctcagcagatttcgatgcaatgcctgccgcgggataga
cagcttctggaacgagttttgagccatttggcgcaggaggaaattgcgaacgagagcagt
cgccaacactcggagagagagaatgcatggcacgagctactatcctccaactgcctggcc
gagatcagcagcgatgaagagcagctgcgcttggcagagaaggcgaagtgctattgcgta
gtggagtacctactggagaagcttgagcgatacgataccatcctggattgctacatccga
aacgaagccaggcacgaaaccatgtttgcttatatggaacgccatgtcgcttcaccgaag
cgaagcatttaccggcagttgaaaaggcatctaagggagcttctagcgatcaatgccaag
gaaaccacacgcttgctggcgctgcactatccagaaaagattcatgagcttttagatggc
ctgagaagggaggagaatttgttatttctgttcctcaagtgcctcaatgatcgtaaaagc
gcactggaagccagccaaatggagttactactggaactatattgtaaaatggagtcggcg
tctaccgtcgaggaattccttcgttccaattcgggttatcgcttggagaaggccattgcc
atagctgaaagccatcaccttaaccgatctgtgatttatctgtatgaaaagcaagagagc
tatgcgaaagcctttgagctgtccatggaactgcttaagtccgctgctggcgaggaagca
gccaaggaggctcagaccatatcggctcttttggctcggtctgtggaaacgttgccagct
caggaacttgaacgctgttggttcgctctcttgcaatatattctgccgcatcaggagctt
cagtccattaccaaatctctgctgcacgaggcctcgcagcatatcgatctgcataatttg
gttcaattgattatgaatacccacaatgtgtcaactagtttcggtgatataaaggatctt
ctaatgggtatgctggacagttcgaggcacaaaacggaggctttgcgagcttcagctgga
gccttgtgtcaagatcttcacctggagttcgtcaagcgctaccagcacgcacatcgtgga
ctttgggtgaccaccacaaagtgctccgtgtgtcgccaaaggctgtacgatcacagtcag
gtgctaatctttggcggatgcgggcatggcatacacgagcagtgcatggaggagtcggag
actctgtttgaagaatgtccacggtgctttacggccattccagaccaaagtattggtttg
ccgcggccaaataaaaatctaatcagcatttcctcgtccctggaaatgggtgccttgcaa
ctgaaggcaccgcccaggcgatttatttag
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integrated database retrieval system
