Drosophila sechellia: 6611036
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Entry
6611036 CDS
T01064
Name
(RefSeq) small RNA degrading nuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
dse
Drosophila sechellia
Pathway
dse03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
6611036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dse03009
]
6611036
Ribosome biogenesis [BR:
dse03009
]
Eukaryotic type
Pre-60S particles
RNases
6611036
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
UBAP1-MVB12_assoc
AMG1_III
Motif
Other DBs
NCBI-GeneID:
6611036
NCBI-ProteinID:
XP_002035593
UniProt:
B4HUV8
LinkDB
All DBs
Position
3L
Genome browser
AA seq
706 aa
AA seq
DB search
MMWTRTTIALRRIARSPSLNGKRSRMKEQMSAKQHERNEKKKKKLAALANLMELNDRDRL
HEAELAKKRDAEVDVEEKSAAKAEDGDDGFILVGSKRKPRNRRQNAEQEADSQTVPGTSD
PEEPVTKKTRNNDAGGDSLPLEIGTLSEDQYNQLSAELRRRKRELENVPALRLREMGQRA
SLETPQDARTPIFLTDIQNLLMCALIGQKSPCRPDRWCSVEKWLSLSHSVVVILEGLSLY
HYLSNETHFEATNRIFSTKLEMMLPTQEEGQKIIDEIAKIPLTNVQARRLIDEHGSLESA
VELNKDPTLFVKTIFPIESTKSEADDMHEDDKFPRTKLLLSALQMVDEGYPIPLQGELHT
RFRNFKFTKDVYAPVTNRSPMFGVDCEMCHTEAGCNELTRISIVNENYETVYETLVLPNN
RITDYLTQYSGITAEIMEQVTKRLNVVQKEVSELLPPDAILVGQSLNSDLNAMKMMHPYV
IDTSVCFNTSGVRRRKTKLKDLARTFLQEIIQENIDGHDSIEDSRATLKLVKKKLANSIE
FGDQILTQHKQLQELANASSGDTISNNLFAHVAKRDKRTAIVTVGELQPHLKEVIEKAGE
AAPKDHSTSVRVHEVSTAKEAIRKVNEVALENALTIANLRVPEQDFLLDSAQRSVAKLDK
TIDRLWKSVAHNGLFLVIMGGSTECSKGVAKIAIKRLNGSDQTMES
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggaccaggacgacaatcgcactgcgcagaattgccaggtcgcccagcttgaac
ggtaagcgctccaggatgaaggaacaaatgtccgccaagcagcacgagcgcaacgaaaag
aagaaaaagaagctggcggccctggcgaacctgatggagctcaacgatcgcgatcgattg
cacgaggcagagttggccaaaaagcgcgatgcagaggtcgatgtggaggagaagtcagca
gcaaaagcggaggacggggacgacggcttcatcttggtgggcagcaaacgcaaacctcga
aaccgtcgtcaaaacgccgagcaggaggcggattcacagactgtccccggaacatcagat
cctgaagagccggttaccaagaaaacccgcaataacgatgctggtggcgatagcctgccg
ctggagatcggcacgctatccgaggatcagtacaatcagttgtcggcggagttgagacgt
cgcaaacgggagctggagaacgtaccggccctgcgactgcgtgagatgggtcagcgcgcc
tccctggagactccgcaagatgctcgcacgcccatctttctaaccgacatccagaacctg
ttaatgtgcgcactcattggccagaagagcccctgccgtccggatcgctggtgcagcgtg
gagaagtggctcagtctgtcgcacagtgtggtggtcattctggagggactatctctctac
cactatctgtctaacgagacccactttgaggccaccaacaggatattcagcacgaagctg
gagatgatgcttccaacgcaggaggagggccagaagattattgacgagattgccaagatt
cctctcaccaatgtgcaggcacgcagactgatagacgagcacggctccctggagtcggct
gttgagctgaacaaagatcccactttgtttgtaaagacaatctttccaatcgaaagcact
aaatctgaggcggatgacatgcatgaggatgacaagttcccacgcactaagctcttgctg
tcagccctgcaaatggtcgacgagggctatcctattcctttgcagggcgagctacacact
cgtttccgaaactttaagtttactaaggatgtgtatgcgccggtaaccaatcgcagtccc
atgttcggcgtagattgtgaaatgtgtcacacggaggcgggttgtaacgagctaacccga
atctctattgtcaacgaaaattacgagaccgtttatgaaacgctagtgttgccaaataac
cggatcaccgactatctgacccagtattcgggcataaccgcagaaattatggagcaagtg
accaagaggctgaatgttgtgcaaaaggaagtgtccgaattactgcctccagatgccatc
ctggtggggcagtctctaaactctgatttgaacgccatgaaaatgatgcacccgtatgta
attgacaccagcgtgtgctttaacacatctggggtgcgtcgacgcaagaccaagctgaag
gacctggccaggacttttttacaggaaattatccaggagaacatcgatggtcacgattcc
attgaggattcgcgagccacgctaaagctcgtcaagaagaagttggcaaacagcatcgag
ttcggagaccagatcctcacgcagcacaagcaattgcaggagttggcgaacgcatccagc
ggcgataccatatccaacaatctgtttgcacatgtggcaaagcgggataagcgcacggcc
attgtcacggtcggcgagctgcagccccatctaaaggaggtgatcgaaaaggcgggagag
gcagcgccgaaggatcacagtacgtcggtgcgtgtccacgaggtatccacggccaaggag
gccattcgtaaggtcaatgaagttgcactggaaaatgccttgacaattgccaacctccgc
gtgccagagcaggactttctgttggacagtgcacagcggagtgttgccaaactggacaag
accatcgatcgcctgtggaagtcagttgcgcacaacggactcttcctcgtcatcatgggc
ggatcgacagagtgctctaagggcgtagccaaaatagccatcaagcgactaaacggatcg
gatcagactatggaaagttag
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