KEGG   Drosophila sechellia: 6611995
Entry
6611995           CDS       T01064                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
dse  Drosophila sechellia
Pathway
dse03030  DNA replication
dse03410  Base excision repair
dse03420  Nucleotide excision repair
dse03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    6611995
   03410 Base excision repair
    6611995
   03420 Nucleotide excision repair
    6611995
   03430 Mismatch repair
    6611995
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dse03032]
    6611995
   03036 Chromosome and associated proteins [BR:dse03036]
    6611995
   03400 DNA repair and recombination proteins [BR:dse03400]
    6611995
DNA replication proteins [BR:dse03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    6611995
  DNA Replication Termination Factors
   ELG1-RFC complex
    6611995
Chromosome and associated proteins [BR:dse03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    6611995
DNA repair and recombination proteins [BR:dse03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     6611995
  Check point factors
   HRAD17(Rad24)-RFC complex
    6611995
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 DUF815 AAA_14 AAA_11 AAA_assoc_2 AAA_16 ResIII DEAD RuvB_N AAA_lid_RFC1 AAA_7 PhoH AAA_5 AAA_30 AAA_19 AAA_24 nSTAND_NTPase5 nSTAND3 Mg_chelatase RCF1-5-like_lid bpMoxR TIP49 DUF8027
Other DBs
NCBI-GeneID: 6611995
NCBI-ProteinID: XP_002036512
UniProt: B4HWP0
LinkDB
Position
2L:10209613..10210968
AA seq 332 aa
MSETSGPAVRMPWVEKYRPSGLDDLISHEEIISTITRFISRKQLPHLLFYGPPGTGKTST
ILACARQLYSPQQFKSMVLELNASDDRGIGIVRGQILNFASTRTIFCDTFKLIILDEADA
MTNDAQNALRRIIEKYTDNVRFCVICNYLSKIIPALQSRCTRFRFAPLSQDQMMPRLEKI
IEAEAVQITEDGKRALLTLAKGDMRKVLNVLQSTVMAFDTVNEDNVYMCVGYPLRQDIEQ
ILKALLSGSSLEDSFKTVESAKYARGLALEDIITELHLFVMRLELPMSVMNKLIVKLAQI
EERLAKGCTEVAQTAALVAAFFICRDMVSMEK
NT seq 999 nt   +upstreamnt  +downstreamnt
atgtcggagaccagtggacccgcagtgcgcatgccttgggtggagaagtacagaccaagc
ggactcgatgatttgatatctcacgaggaaataatatcaacaattacccgctttataagc
cgcaagcagctgccccatttgctgttctacggaccacctggcacgggaaaaacgagcaca
atcctggcctgcgctcgccaattgtattcccctcagcagttcaagtccatggttctggag
ctgaatgcctcggatgaccgaggcatcgggattgtgcgcggtcaaatccttaacttcgcg
tccacacgcaccattttctgcgacacctttaagctgattattttggacgaggccgatgcc
atgaccaacgatgcccagaatgccctgcgccgcattattgagaaatatacggacaacgtg
cgcttctgtgtgatttgcaattatttgagcaaaatcattccggccctgcagtcgcgttgc
acccgttttcggttcgctccattatctcaggatcagatgatgccgcgactggaaaaaatc
atcgaagccgaagccgttcagattaccgaagacggcaagcgggcactgctaacccttgcc
aaaggcgatatgagaaaggtcttgaacgtcctgcagagtaccgtgatggcgtttgatacg
gtcaacgaggacaacgtttacatgtgtgtgggctatccgttgaggcaggatattgaacag
atattgaaggccttgctatccggcagtagcttggaggactccttcaaaactgtcgaaagt
gccaagtacgcaagaggtctcgctttggaagacatcatcacagaattgcatttgtttgtt
atgagacttgagctgcccatgtcggtgatgaataagcttattgtaaagctagctcagatc
gaagagagattggccaaaggatgtacagaagtggctcaaacggcagctctggtagccgcc
ttctttatttgccgggatatggtttcaatggagaagtga

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