KEGG   Drosophila sechellia: 6612126
Entry
6612126           CDS       T01064                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
dse  Drosophila sechellia
Pathway
dse03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dse00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    6612126
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dse03019]
    6612126
Messenger RNA biogenesis [BR:dse03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     6612126
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     6612126
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1 ECR1_N_2
Other DBs
NCBI-GeneID: 6612126
NCBI-ProteinID: XP_002036643
UniProt: B4HX21
LinkDB
Position
2L:complement(10886876..10887853)
AA seq 204 aa
MSEQQDENVVCLPGERLCRSEDSIVLGIGTYEQNGYVYASKSGIVNIEDSGDNCQVVSVH
KPGFHLTIPATGDVVTARVLVTTPKFAKCAIFCVRNVLLESSYRGLLRKEDVRETEKDRV
DIYKSFRPGDVILARVINQLEQTFLLTTAENELGVVIAYASDYRKTRVPMVPVGWSEMQC
PQTTIKEPRKVAKVLPESSINAVK
NT seq 615 nt   +upstreamnt  +downstreamnt
atgagtgaacagcaggatgagaatgtagtctgcctgcccggggagcgactctgcagatcc
gaggatagcatagttctgggcataggcacctacgagcagaatggctacgtttacgcctcg
aagtctggaattgtcaacatcgaagattcgggtgataactgccaggtggttagtgtgcat
aagcccggcttccatctaaccataccagccaccggagacgtggtcacagccagagttctc
gtcacaactccaaaattcgcaaagtgtgccattttctgtgtacgaaatgtgctgctggaa
agcagctaccgtggactcctgcgcaaggaggatgtccgggagaccgaaaaagatcgcgtc
gatatctacaagtccttccgaccgggcgatgtcatcctggcgagggtcatcaaccaactg
gagcagaccttcctcctcaccaccgccgaaaatgaactaggcgtggtcatcgcctatgcc
agtgattaccgaaagacccgcgtgcccatggttccggtcggctggagcgagatgcagtgc
ccccagaccacgatcaaggagccacggaaagtggccaaagttctgcctgagagttcaata
aatgctgtgaaataa

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