Drosophila sechellia: 6612126
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Entry
6612126 CDS
T01064
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
dse
Drosophila sechellia
Pathway
dse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6612126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dse03019
]
6612126
Messenger RNA biogenesis [BR:
dse03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
6612126
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
6612126
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
6612126
NCBI-ProteinID:
XP_002036643
UniProt:
B4HX21
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All DBs
Position
2L:complement(10886876..10887853)
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AA seq
204 aa
AA seq
DB search
MSEQQDENVVCLPGERLCRSEDSIVLGIGTYEQNGYVYASKSGIVNIEDSGDNCQVVSVH
KPGFHLTIPATGDVVTARVLVTTPKFAKCAIFCVRNVLLESSYRGLLRKEDVRETEKDRV
DIYKSFRPGDVILARVINQLEQTFLLTTAENELGVVIAYASDYRKTRVPMVPVGWSEMQC
PQTTIKEPRKVAKVLPESSINAVK
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacagcaggatgagaatgtagtctgcctgcccggggagcgactctgcagatcc
gaggatagcatagttctgggcataggcacctacgagcagaatggctacgtttacgcctcg
aagtctggaattgtcaacatcgaagattcgggtgataactgccaggtggttagtgtgcat
aagcccggcttccatctaaccataccagccaccggagacgtggtcacagccagagttctc
gtcacaactccaaaattcgcaaagtgtgccattttctgtgtacgaaatgtgctgctggaa
agcagctaccgtggactcctgcgcaaggaggatgtccgggagaccgaaaaagatcgcgtc
gatatctacaagtccttccgaccgggcgatgtcatcctggcgagggtcatcaaccaactg
gagcagaccttcctcctcaccaccgccgaaaatgaactaggcgtggtcatcgcctatgcc
agtgattaccgaaagacccgcgtgcccatggttccggtcggctggagcgagatgcagtgc
ccccagaccacgatcaaggagccacggaaagtggccaaagttctgcctgagagttcaata
aatgctgtgaaataa
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integrated database retrieval system