Drosophila sechellia: 6612294
Help
Entry
6612294 CDS
T01064
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
dse
Drosophila sechellia
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dse03021
]
6612294
03036 Chromosome and associated proteins [BR:
dse03036
]
6612294
Transcription machinery [BR:
dse03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
6612294
Chromosome and associated proteins [BR:
dse03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
6612294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
S1
Tex_central_region
Spt6_S1
HHH_3
HHH_9
Tex_YqgF
OB_RRP5_4th
TFIIA
Tex_N
S1_RRP5
Med3
Motif
Other DBs
NCBI-GeneID:
6612294
NCBI-ProteinID:
XP_002036804
UniProt:
B4I0D2
LinkDB
All DBs
Position
X:5992353..5999517
Genome browser
AA seq
1839 aa
AA seq
DB search
MAEFLDSEAEESEEEEELDVNERKRLKKLKAAVSDSSEEEEDDEERLREELKDLIDDNPI
EEDDGSGYDSDGVGSGKKRKKHEDDDLDDRLEDDDYDLIEENLGVKVERRKRFKRLRRIH
DNESDGEEQHVDEGLVREQIAEQLFDENDESIGHRSERSHREADDYDDVDTESDADDFIV
DDNGRPIAEKKKKRRPIFTDASLQEGQDIFGVDFDYDDFSKYEEDDYEDDSEGDEYDEDL
GVGDDMRVKKKKALKKKVVKKTIFDIYEPSELKRGHFTDMDNEIRKTDIPERMQLREVPV
TPVPEGSDELDLEAEWIYKYAFCKHTVSEQEKPENREKMRKPPTTVNKIKQTLEFIRNQQ
LEVPFIAFYRKEYVKPELNIDDLWKVYYFDGIWCQLNDRKRKLKVLFEKMRQFQLDTLCA
DTDKPIPDDVRLILDSDFERLADVQSMEELKDVHMYFLLNYSHELPRMQAEQRRKAIQER
REAKARRQAAAAENGDDAAEAIVVPEPEDDDDSELIDYQLKQASNSSPYAVFRKAGICGF
AKHFGLTPEQYAENLRDNYQRNEITQESIGPTELAKQYLSPRFMTTEEVIHAAKYVVARQ
LAQEPLLRKTMREVYFDRARINIRPTKNGMVLIDENSPVYSMKYVAKKPVSDLFGDQFIK
LMMAEEEKLLEITFLEEFEGNACANGTPGDYVEESKALYQLDQFAKHVQEWNKLRAECVQ
LALQKWVIPDLIKELRSTLHEEAQQFVLRSCTGKLYKWLKVAPYKPQLPTDFGYEEWSTL
RGIRVLGLAYDPDHSVAAFCAVTTVEGDISDYLRLPNILKRKNSYNLEEKAQKMADLRKL
SDFIKMKKPHIVVIGAESRDAQNIQADIKEILHELETSEQFPPIEVEIIDNELAKIYANS
KKGESDFKEYPPLLKQAASLARKMQDPLVEYSQLCDADDEILCLRYHPLQERVPREQLLE
QLSLQFINRTSEVGLDINLMVQNSRTINLLQYICGLGPRKGQALLKLLKQSNQRLENRTQ
LVTVCHLGPRVFINCSGFIKIDTSSLGDSTEAYVEVLDGSRVHPETYEWARKMAIDAMEY
DDEETNPAGALEEILESPERLKDLDLDAFAVELERQGFGSKSITLYDIRNELSCLYKDYR
TPYTKPSAEELFDMLTKETPDSFYVGKCVTAMVTGFTYRRPQGDQLDSANPVRIDSNESW
QCPFCHKDDFPELSEVWNHFDANACPGQPSGVRVRLENGLPGFIHIKNLSDRQVRNPEER
VRVSQMIHVRIIKIDIDRFSVECSSRTADLKDVNNEWRPRRDNYYDFVTEELDNRKVSDA
KARALKRKIYARRVIAHPSFFNKSYAEVVAMLAGADQGEVALRPSSKSKDHLTATWKVAD
DIFQHIDVREEGKENDFSLGRSLWIGTEEFEDLDEIIARHIMPMALAARELIQYKYYKPI
TVNGDENERDVMEKLLREEKANDPKKIHYFFTASRAMPGKFLLSYLPKTKVRHEYVTVMP
EGYRFRGQIFDTVNSLLRWFKEHWLDPTATPSSASVSNLTPLHMMRPPPTISSSSQTSLG
PQAPYSITGSVTGGTPRSGISSAAGGGGSSAYSITQSITGYGTSGSSAQGAGLSSSHYGS
SSTPSFGAINTPYTPSGQTPFMTPYTPHASQTPRYGHNVPSPSSQSSSSQRHHYGSSSGT
GSTPRYNDMGGGGGSGGGGFNAYSMQPHHQQRAKENLDWQLANDAWARRRPQQHQSHQPY
QAQQQQQQQHQQQQHHHSQQQQHMGMSMNMGITMSLGRGTGGGGGGGYGSTPVNDYSTGG
GHNRGMGMSSKASVRSTPRTNASPHSMNLGDATPLYDEN
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatttctggactccgaggccgaggaatcggaggaggaggaagaattggacgtc
aacgagcgcaagaggctcaagaaactgaaggcggccgtctccgatagtagcgaagaagaa
gaagatgacgaggaacggctgcgcgaagagctcaaagatctgatcgacgacaatcccatc
gaggaggacgatggcagcggttacgattctgatggcgtcggcagcggcaagaagcgcaaa
aagcacgaggacgacgatctggacgatcgactggaggacgacgactacgatctgatcgag
gagaatctgggcgtcaaagtcgagagacggaagcggttcaagcgtctgcgtcgcatccac
gacaacgaaagcgatggcgaggagcagcacgtggacgagggtctggtgcgtgagcagatt
gccgagcagttgttcgacgagaacgatgagagcattgggcatcgcagcgagcgcagtcac
agggaggcggacgactacgacgacgtggatacggagtcggacgcggatgacttcattgtg
gacgataatgggcgtcccatagccgagaagaagaagaagcggcgccccatctttacagac
gcatcactccaagagggtcaggacatctttggcgtagacttcgactatgacgacttctca
aagtacgaggaagacgactacgaagatgactcggaaggagatgagtacgatgaggatctg
ggcgtcggcgatgatatgcgcgtcaagaagaagaaagcgctcaaaaagaaggtggtcaag
aagacaatcttcgacatatacgagcccagcgagctcaagcgtggccatttcaccgatatg
gacaacgagattcgcaagacagacatcccagaacgaatgcagctgcgcgaggtgcccgta
accccggtgcccgagggatcagacgagctggacctcgaggctgaatggatctacaagtat
gccttctgcaagcacactgtttcagaacaggagaagccggagaaccgcgagaagatgcgc
aaaccaccgacaaccgttaacaagattaagcagacgctagaatttatacgcaaccagcag
ttggaggtgccctttatagccttctatcgcaaggagtacgtgaagccagagctgaatatc
gacgatctctggaaggtttactacttcgatggaatctggtgtcagctaaacgatcgaaag
cgcaagctaaaggtgcttttcgagaagatgcgtcagttccagctggacacgctatgcgcc
gacacagataaacccataccggatgatgttcgcctcatactggacagcgatttcgagcgc
ctcgccgacgtgcagtccatggaggagctgaaggacgtgcacatgtactttttgctgaac
tattcgcatgagctgccccgcatgcaggcggagcagcgtcgaaaggctatccaggagcgt
cgcgaggccaaggcgcgtcgccaggcagccgctgctgaaaacggtgacgacgcggccgag
gcgatagttgtaccagagccggaagatgatgacgattccgagctaatcgattaccaactg
aagcaggcgtccaacagcagtccctatgcggtgttccgcaaggcaggcatctgcggcttt
gccaagcactttggtctcacgccggagcagtatgccgaaaatctgcgcgacaattaccag
cgcaatgagatcacccaggaaagcatcggtcccacagagctggccaagcaatatttgtct
ccgcgcttcatgaccacggaagaggttatccatgctgcaaaatacgtggtggcccgacag
ctggcacaggagcctctgctgcgcaagaccatgcgtgaggtgtacttcgacagagccagg
attaacatacggcccaccaagaatggcatggtgctgatcgatgagaactcgcctgtgtac
tcgatgaagtacgtggccaagaagccggtaagcgatctctttggcgatcaattcataaag
ctaatgatggccgaggaggagaagctgctggagattacgttcctcgaggagttcgaaggc
aatgcgtgtgccaacggaacacccggagactatgtggaagagtccaaggccctgtaccag
ctggatcagtttgccaagcacgtgcaggagtggaataagctgcgggcggaatgcgtacag
ctggcactgcagaagtgggtcattccggatctgatcaaggagctgcgctccactctgcac
gaggaggctcagcaatttgtgctgcgttcctgcacgggtaagctgtacaagtggctaaag
gtggcaccctataaaccgcaactgcccaccgattttggctacgaggagtggagcacgctg
aggggcatacgggtgctgggtctggcctacgatcccgaccactcagtggccgctttctgt
gcggtgaccaccgtggagggcgacatctccgactacctgcgactgccgaacattctgaag
cgcaagaattcctacaaccttgaggagaaggcccagaagatggccgaccttcgaaagctg
agtgactttatcaaaatgaagaagccacacattgttgtcatcggagcggaatcgcgcgat
gcccagaacatccaagcagacataaaggagattctgcatgagctcgagacctccgaacag
tttccgcccatcgaggtggagataatcgacaacgagctggccaagatctatgccaactcg
aagaagggcgagtctgatttcaaggagtatcctcccctgctgaagcaggctgcttcgctg
gcccgcaagatgcaggatccgctagtggaatactcgcagctgtgtgatgcggacgacgag
attctgtgcctgcgctaccatccgctgcaggagcgtgtgccgcgcgaacagctgctggag
cagctcagtctgcagttcatcaatcgaacgagcgaggtgggcctggacatcaacctgatg
gtgcagaactcacggaccatcaacctgctgcagtacatctgtggcttgggtccgcgcaag
ggtcaggctttactcaaactgctcaagcagagcaaccagcggttggagaaccgcacccag
ctggtcaccgtgtgtcatctggggcccagggtctttatcaactgcagcggtttcattaag
atcgatacctcatcgctgggcgacagcacagaggcgtatgtcgaggtgctggacgggtcg
cgtgtgcatccagaaacgtacgagtgggccagaaagatggccatcgatgccatggagtac
gacgacgaggagaccaatccggccggtgcccttgaggaaattctcgagtcgccagagcgc
cttaaggatcttgatctggacgcattcgccgtggaactggagcgccagggattcggtagc
aagagcatcaccttgtacgacatccgaaacgagttgagctgcctgtacaaggactaccgc
actccgtacaccaagcccagtgcggaggagctcttcgatatgctgaccaaggagacgccc
gactcgttttacgtgggcaagtgcgtcacggccatggtcaccggtttcacgtatcgtcgg
ccgcagggcgatcagctggacagcgcgaatccggtgcgtatagattccaacgaaagctgg
cagtgccccttctgccacaaggacgacttccccgagctgtccgaggtgtggaatcacttt
gacgcgaacgcgtgccctggccagccatctggcgtgcgtgtgcgtctggagaacggcctg
ccaggctttatacacatcaagaacttgtccgatagacaggttcgcaatcccgaagaacgt
gtgcgcgtctcacagatgattcatgtgcgcatcattaagatagacattgaccggttctca
gtcgaatgctcctcgaggaccgctgatcttaaggatgtgaacaatgagtggcggccgcgg
cgcgacaactactatgattttgtgactgaggagctggacaatcggaaagtgagcgatgcc
aaggccagggccctcaagcgcaaaatctacgcccgtcgcgtaatcgcccatcccagcttc
ttcaacaagtcgtacgcggaggtggtggccatgctggctggggccgatcagggcgaggtg
gccctgcgtccgagcagcaagtccaaggaccatctgacagccacctggaaggtggccgac
gacatcttccagcacatcgatgtgcgcgaggagggtaaagagaacgatttcagcctgggc
aggagtctgtggatcggcaccgaggagttcgaggatctggacgagatcatcgcccgccac
atcatgccgatggccttggctgcccgcgaactgatacagtacaagtactacaagccaatc
acggtgaacggtgatgaaaatgaacgggatgtcatggaaaagttgctgcgcgaggagaag
gcaaatgatccgaagaagatacactacttctttacggcctcacgcgccatgccgggcaag
ttcctgctgtcctatctgcccaagacgaaggtgcgccacgagtatgtgacggtcatgccg
gagggctatcgtttccgtggccagattttcgatacggtcaacagtctgctgcgctggttc
aaggaacactggctggatccaacggccacgccgtccagcgcctcggtgtccaatttaacg
ccactgcacatgatgcgtccaccgccgacgatctcgtcgtcatcccagacatctttgggc
ccccaggcaccctacagcatcactggcagcgtgactggtggaacgccgcgcagtggcatc
agcagtgccgctggcggtggcggttcgagcgcctactccattacgcaatccatcactggc
tacggcacgtcgggcagttctgctcaaggtgctggactatcttcctcccactatggcagc
tcatcgacgccgtcgtttggcgccattaatacgccatacacgcccagtggacagactccg
ttcatgacgccctacacaccgcatgcctcacagacgcctcgctatggtcacaacgtgccc
agtcccagctcgcaatcctcaagcagtcagaggcatcactacggcagcagttccggaacg
ggcagcacgcccaggtataacgatatgggaggaggaggcggtagtggcggtggtggtttc
aatgcctacagcatgcagccgcatcaccagcaacgtgccaaagagaacctcgactggcag
ctggccaacgatgcatgggcaagacgcagaccgcagcagcatcagtcacatcagccgtat
caggcccagcagcagcagcagcagcagcaccagcagcagcagcatcatcactcgcagcag
caacagcatatgggcatgagcatgaacatgggcattacaatgtcactgggacgtggcacc
ggtggcggcggaggcggtggctatggatcgacgcctgtcaatgactacagcactggaggc
ggtcataatcggggtatgggcatgtcctcgaaggcgtctgtgcgcagtacgccgcgcacc
aacgcctctccgcactccatgaatctgggcgatgccacgcccctctacgatgagaactag
DBGET
integrated database retrieval system
