Drosophila sechellia: 6612639
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Entry
6612639 CDS
T01064
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
dse
Drosophila sechellia
Pathway
dse03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6612639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dse03019
]
6612639
Messenger RNA biogenesis [BR:
dse03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
6612639
U7-dependent histone pre-mRNA processing factors
6612639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
PglZ_C
Motif
Other DBs
NCBI-GeneID:
6612639
NCBI-ProteinID:
XP_032577710
LinkDB
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Position
3R:27479124..27481624
Genome browser
AA seq
756 aa
AA seq
DB search
MTSIIKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLL
SHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVD
TAFEKITQLKYNQTVSLKGKGYGISITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKK
ERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTA
GRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARN
NPFQFKHIQLCHSLADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNANNSIILTTRT
SPGTLAMELVENCAPGKQIELDVRRRVDLEGAELEEYLRTQGEKLNPLIVKPDVEEESSS
ESEDDIEMSVITGKHDIVVRAEGRHHSGFFKSNKRHHVMFPYHEEKVKCDEYGEIINLDD
YRIADATGYEFVPMEEQNKENVKKEEPGIGADQQANGAIVDNDVQLLEKPTKLINQRKTI
EVNAQVQRIDFEGRSDGESMLKILSQLRPRRVIVIHGTAEGTQVVARHCEQNVGARVFTP
QKGEIIDVTTEIHIYQVRLTEGLVSQLQFQKGKDAEVAWVDGRLGMRVKAIEAPMDVTVE
QDASVQEGKTLTLETLADDEIPIHNSVLINELKLSDFKQTLLRNNINSEFSGGVLWCSNG
TLALRRVDAGKVAMEGCLSEEYYKIRELLYEQYAIV
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgacctccattatcaagctgcacactatatctggagcgatggacgagtccccgccatgt
tatatcctacagatagacgatgtgcggatattactcgactgcggatgggacgaaaagttc
gatgccaactttatcaaggaactgaagaggcaggtgcacaccctggacgccgtgctgcta
tcccatccggatgcatatcatcttggagccctgccatacttggtgggcaagctggggctc
aattgccccatctacgccaccattcccgtgttcaaaatgggtcaaatgttcatgtatgac
ctttacatgtcgcacttcaacatgggcgactttgatctattttcgctggacgacgtggat
acggctttcgaaaagatcacccagttgaaatacaaccaaacggtttcactgaagggcaag
ggatatggaatatccattacgcctttgaacgctggacacatgatcggaggcaccatctgg
aaaatcgtcaaggtgggcgaggaggatattgtgtacgccaccgacttcaaccacaagaag
gagcgccacttgagtggctgcgagctggacaggctgcaaagaccttcgctgctcattacc
gacgcatacaatgcacagtaccagcaggccagaaggagggctcgcgatgaaaagctcatg
accaacatcctgcagacggtgcgtaacaacggcaatgtcctgatagccgtggacacggca
ggacgagtcctggagttggcccacatgctggaccagctgtggaagaacaaggaatcgggt
ctgatggcctactccctggcccttcttaacaatgtgagctacaacgtgattgagttcgcc
aagtcgcagatcgaatggatgagtgacaaactcacgaaggctttcgaaggtgcccgcaac
aatcctttccagttcaagcacatccagttgtgccactcactggcggacgtctataaattg
cccgctggtccaaaagtggtgttggccagtactccagatctggagagcggatttacgagg
gatctcttcgtgcaatgggccagcaatgccaacaatagcataatccttactactcgtacg
tctcccggaactttagccatggaactggtggagaactgcgcaccgggcaagcaaatcgaa
ttggacgtcaggcgaagagttgacttagaaggagctgagctggaggagtacctacgcaca
cagggcgagaaacttaatccccttatcgtgaagcccgatgtggaggaggagagcagttcc
gagtccgaggacgacatcgagatgagcgtcatcactggcaagcatgatattgttgtcaga
gcagagggtcgccatcactccggttttttcaagtccaacaaacgacaccacgtgatgttc
ccctatcacgaggaaaaggtgaagtgcgatgaatatggggagataatcaatctagacgac
tatcggattgcggatgcaacaggctatgagtttgtacccatggaggagcaaaacaaggag
aatgttaaaaaggaagaaccgggcataggagcagaccaacaggctaacggagcaatcgtc
gacaatgatgttcagttgctggagaagcccaccaagctgataaaccaacgcaaaacaatc
gaggtaaatgcccaagtccagaggatcgatttcgaaggtcgctctgacggcgagtccatg
ctaaagatcctctcccagttgaggccacgaagggtcatcgtcatacacggcactgccgaa
ggcacacaagtagtggccaggcactgcgagcaaaatgtcggtgcgcgcgtttttacgccg
cagaagggcgaaatcattgatgtcaccactgagatccacatctaccaggtacgcctgacg
gaaggacttgtctcccagctgcagttccaaaagggaaaggacgcggaggtggcgtgggtg
gatggtcgcctgggcatgcgcgtcaaggccatcgaagcacccatggacgtaactgtggag
caggacgcatccgtgcaagaaggcaagacattgactcttgaaacattggcggacgatgag
attcctatccacaactcagtgctcattaacgagctgaaactgtccgacttcaagcagact
ctcctgcggaataacatcaactcggagttctccggcggcgtgctctggtgcagcaacgga
actctggccttgaggcgagtggatgccggcaaggtggccatggagggatgcttatccgag
gagtactacaagatcagggagttgctgtacgagcagtatgcgatcgtttaa
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